RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MTCH1Q9NZJ7 389 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 OR14J1Q9UGF5 321 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 IGKV1-9A0A0C4DH69 117 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 RNASEK-C17orf49H0YIS7 233 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 SULT1B1O43704 296 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 TK1P04183 234 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 ALDOBP05062 364 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 CHRM2P08172 466 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 FBP1P09467 338 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 OCMP0CE72 109 aaPredicted RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 IGFBP3P17936 291 aaPredicted RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 RAB3AP20336 220 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 SERPINB10P48595 397 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 CEBPDP49716 269 aaPredicted RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 UBE2E1P51965 193 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 MTCP1P56278 107 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 RPL15P61313 204 aaKnown RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 RPL31P62899 125 aaKnown RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 ZNF529Q6P280 563 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 FIP1L1Q6UN15 594 aaKnown RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 MKXQ8IYA7 352 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 BATF2Q8N1L9 274 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 SLAMF9Q96A28 289 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 SEBOXQ9HB31 216 aaPredicted RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 TMEM138Q9NPI0 162 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 C19orf12Q9NSK7 152 aa13.65□□□□□ -0.22
PKP3-209ENST00000533069 CCDC59Q9P031 241 aaKnown RBP13.65□□□□□ -0.22
PKP3-209ENST00000533069 DOCK11Q5JSL3 2073 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 hCG_1809904A0A1W2PP81 198 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 A0A1W2PPE2 198 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 A0A1W2PR64 198 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 A0A1W2PRV1 198 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 K7N7A8 449 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 NPFFO15130 113 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 PIN1P1O15428 100 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 RAB3BP20337 219 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 SDC2P34741 201 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 RORCP51449 518 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 DYNC1I2Q13409 638 aaKnown RBP13.64□□□□□ -0.23
PKP3-209ENST00000533069 FOXB2Q5VYV0 432 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 GLT8D1Q68CQ7 371 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 AP3S1Q92572 193 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 EMG1Q92979 244 aaKnown RBP13.64□□□□□ -0.23
PKP3-209ENST00000533069 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
PKP3-209ENST00000533069 NOTOA8MTQ0 251 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 F8VVB4 439 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 F8VWA3 439 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 CDRT1O95170 752 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 BDKRB2P30411 391 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 IER3P46695 156 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 POU3F4P49335 361 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 COL10A1Q03692 680 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 INSL4Q14641 139 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 ASCC1Q8N9N2 400 aaKnown RBP13.63□□□□□ -0.23
PKP3-209ENST00000533069 OR13C9Q8NGT0 318 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 KCTD12Q96CX2 325 aaKnown RBP13.63□□□□□ -0.23
PKP3-209ENST00000533069 UQCC2Q9BRT2 126 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 ZNF747Q9BV97 191 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 PTTG2Q9NZH5 202 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 A3GALT2U3KPV4 340 aa13.63□□□□□ -0.23
PKP3-209ENST00000533069 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 POM121CA8CG34 1229 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 ZNF737O75373 536 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 PAHP00439 452 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 CRYBA1P05813 215 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 SCAND1P57086 179 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 PDZK1IP1Q13113 114 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 KLRD1Q13241 179 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 SPCS2Q15005 226 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 SPIN3Q5JUX0 258 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 FAM27D1Q5T7N8 215 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 TMEM200BQ69YZ2 307 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 FAM58AQ8N1B3 248 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 NDNFQ8TB73 568 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 DYNC2LI1Q8TCX1 351 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 ACOT12Q8WYK0 555 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 DYRK2Q92630 601 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 TNFRSF19Q9NS68 423 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 TAS2R4Q9NYW5 299 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 ZNRD1Q9P1U0 126 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 V9GY05 133 aa13.62□□□□□ -0.23
PKP3-209ENST00000533069 A0A1B0GUS0 222 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 A0A1W2PPK0 400 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 MEIOCA2RUB1 952 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 BTBD17A6NE02 478 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 HAND1O96004 215 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 IGHV4-59P01825 116 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 CD37P11049 281 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 ZNF182P17025 639 aaPredicted RBP13.61□□□□□ -0.23
PKP3-209ENST00000533069 SAA4P35542 130 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 RPS19P39019 145 aaKnown RBP13.61□□□□□ -0.23
PKP3-209ENST00000533069 DLX1P56177 255 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 MIDNQ504T8 468 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 GDPD3Q7L5L3 318 aa13.61□□□□□ -0.23
PKP3-209ENST00000533069 LRRTM1Q86UE6 522 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms