RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.77□□□□□ -0.69
VPS28-211ENST00000530790 FBLN5Q9UBX5 448 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 TCF19Q9Y242 345 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 A0A0G2JK05 382 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 ODAMA1E959 279 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 F2RL2O00254 374 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 HSPB6O14558 160 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 DEGS1O15121 323 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 PTGFRP43088 359 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 GLIPR1P48060 266 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 AESQ08117 197 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 ATXN7L3Q14CW9 347 aaPredicted RBP10.76□□□□□ -0.69
VPS28-211ENST00000530790 KRBOX4Q5JUW0 171 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 OR52W1Q6IF63 320 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 ZNF529Q6P280 563 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 HEPN1Q6WQI6 88 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 DTX3Q8N9I9 347 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 OR52N1Q8NH53 320 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 PIFOQ8TCI5 191 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 TMEM80Q96HE8 168 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 NKX3-1Q99801 234 aaPredicted RBP10.76□□□□□ -0.69
VPS28-211ENST00000530790 CDCA4Q9BXL8 241 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 ING3Q9NXR8 418 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 TAS2R3Q9NYW6 316 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 PITPNC1Q9UKF7 332 aa10.76□□□□□ -0.69
VPS28-211ENST00000530790 H0YJX3 145 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 MMP23AO75900 390 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 CDK2P24941 298 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 CAPGP40121 348 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 KIR2DS4P43632 304 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 ADARB1P78563 741 aaKnown RBP10.75□□□□□ -0.69
VPS28-211ENST00000530790 SLC34A1Q06495 639 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 IL13RA2Q14627 380 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 RSU1Q15404 277 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 C2orf68Q2NKX9 166 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 LDLRAD2Q5SZI1 272 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 ELP2Q6IA86 826 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 Q6P435 159 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 TMEM219Q86XT9 240 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 C8orf59Q8N0T1 100 aaPredicted RBP10.75□□□□□ -0.69
VPS28-211ENST00000530790 OR4D6Q8NGJ1 314 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 ZNF596Q8TC21 504 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 CORO2AQ92828 525 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 COQ2Q96H96 371 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 NR1H4Q96RI1 486 aaPredicted RBP10.75□□□□□ -0.69
VPS28-211ENST00000530790 VCXQ9H320 206 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 TMEM138Q9NPI0 162 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 BABAM2Q9NXR7 383 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 OR6C3Q9NZP0 311 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 ZNF281Q9Y2X9 895 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 SIGLEC9Q9Y336 463 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 HILPDAQ9Y5L2 63 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 HSPE1-MOB4S4R3N1 261 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
VPS28-211ENST00000530790 EFCAB10A6NFE3 127 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 OGG1O15527 345 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 ALDOBP05062 364 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 HTR1DP28221 377 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 GLP1RP43220 463 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 OR3A4PP47883 348 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 RAB13P51153 203 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 DYNLT3P51808 116 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 ARHGDIBP52566 201 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 EFNB2P52799 333 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 RIPK1Q13546 671 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 HERPUD1Q15011 391 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 PAN3Q58A45 887 aaKnown RBP10.74□□□□□ -0.69
VPS28-211ENST00000530790 DDI2Q5TDH0 399 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 Q6ZTK2 550 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 RTN4RL2Q86UN3 420 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 ABHD12Q8N2K0 398 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 KLHDC1Q8N7A1 406 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 OR4P4Q8NGL7 312 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 GHSRQ92847 366 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 PPIL3Q9H2H8 161 aaKnown RBP10.74□□□□□ -0.69
VPS28-211ENST00000530790 CKLFQ9UBR5 152 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 CLEC2DQ9UHP7 191 aa10.74□□□□□ -0.69
VPS28-211ENST00000530790 SIRT4Q9Y6E7 314 aaPredicted RBP10.74□□□□□ -0.69
VPS28-211ENST00000530790 FAM172BPA6NC97 362 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 A6NDX4 124 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 ZNF729A6NN14 1252 aaPredicted RBP10.73□□□□□ -0.69
VPS28-211ENST00000530790 MYL12BO14950 172 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 HTR3BO95264 441 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 LALBAP00709 142 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 GNAO1P09471 354 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 BDKRB2P30411 391 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 ZNF93P35789 620 aaPredicted RBP10.73□□□□□ -0.69
VPS28-211ENST00000530790 TAS2R43P59537 309 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 PIGYQ3MUY2 71 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 OGFRL1Q5TC84 451 aaPredicted RBP10.73□□□□□ -0.69
VPS28-211ENST00000530790 DMKNQ6E0U4 476 aaPredicted RBP10.73□□□□□ -0.69
VPS28-211ENST00000530790 BAIAP2L2Q6UXY1 529 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 ZFP41Q8N8Y5 198 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 OR51T1Q8NGJ9 327 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 OR13C5Q8NGS8 318 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms