RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 MED20Q9H944 212 aa8.98□□□□□ -0.97
AMBRA1-207ENST00000529553 PLSCR3Q9NRY6 295 aa8.98□□□□□ -0.97
AMBRA1-207ENST00000529553 LAMP5Q9UJQ1 280 aa8.98□□□□□ -0.97
AMBRA1-207ENST00000529553 U3KQV3 271 aa8.98□□□□□ -0.97
AMBRA1-207ENST00000529553 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
AMBRA1-207ENST00000529553 KBTBD11-OT1A0A1B0GTJ5 212 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 FAM230AA0A1W2PPH8 454 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 ODAMA1E959 279 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 SH2D1BO14796 132 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 SELENOFO60613 162 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 TTRP02766 147 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 FABP3P05413 133 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 CSN2P05814 226 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 FUT6P51993 359 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 GNB1P62873 340 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 ROM1Q03395 351 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 AESQ08117 197 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 GALEQ14376 348 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 C17orf58Q2M2W7 97 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 ZNF829Q3KNS6 432 aaPredicted RBP8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 SLC25A26Q70HW3 274 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 IZUMO1Q8IYV9 350 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 ZNF679Q8IYX0 411 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 FAM58AQ8N1B3 248 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 OTULINQ96BN8 352 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 KIRREL1Q96J84 757 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 ATP6V1G3Q96LB4 118 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 GNB4Q9HAV0 340 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 INTS9Q9NV88 658 aaKnown RBP8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 OR6C3Q9NZP0 311 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 KLHDC2Q9Y2U9 406 aa8.97□□□□□ -0.97
AMBRA1-207ENST00000529553 KMT2AQ03164 3969 aa8.96□□□□□ -0.97
AMBRA1-207ENST00000529553 TRBV2A0A0J9YWF9 115 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 LINC01619G3V211 115 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ARPC1BO15143 372 aaKnown RBP8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 PRODHO43272 600 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ENTPD6O75354 484 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 GAPDHP04406 335 aaKnown RBP8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 CGB3P0DN86 165 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 CGB7P0DN87 165 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 NFYBP25208 207 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 SOX6P35712 828 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ZNF816Q0VGE8 651 aaPredicted RBP8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 DIAPH2-AS1Q14236 149 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 SLC35D3Q5M8T2 416 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 UTF1Q5T230 341 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 HACD2Q6Y1H2 254 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ZNF565Q8N9K5 539 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 OR9Q2Q8NGE9 314 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 LRGUKQ96M69 825 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 S1PR3Q99500 378 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 YIPF3Q9GZM5 350 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 KLK15Q9H2R5 256 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 NCOR1P1Q9H4R4 102 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 MOB1AQ9H8S9 216 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 LINC00574Q9H8X3 128 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 EFCAB1Q9HAE3 211 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ARMC1Q9NVT9 282 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 ABCD2Q9UBJ2 740 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 MRM2Q9UI43 246 aaKnown RBP8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 PSG11Q9UQ72 335 aa8.96□□□□□ -0.98
AMBRA1-207ENST00000529553 IGKV1-27A0A075B6S5 117 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 IGHV1-3A0A0C4DH29 117 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 A0A1B0GTI1 187 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 FAM90A10PA6NDY2 464 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 TNFRSF11BO00300 401 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 CYB5AP00167 134 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 IGLV1-51P01701 117 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 ARSBP15848 533 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 DUSP1P28562 367 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 CD1BP29016 333 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 RAB9AP51151 201 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 RIDAP52758 137 aaKnown RBP8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 ELMOD2Q8IZ81 293 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 OR10A7Q8NGE5 316 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 ASB17Q8WXJ9 295 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 ELOVL1Q9BW60 279 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 DGCR6LQ9BY27 220 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 ACTR3BQ9P1U1 418 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 IL36RNQ9UBH0 155 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 STUB1Q9UNE7 303 aa8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 MRPS28Q9Y2Q9 187 aaKnown RBP8.95□□□□□ -0.98
AMBRA1-207ENST00000529553 SIRPB1O00241 398 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 GATBO75879 557 aaKnown RBP8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 INMTO95050 263 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 CCNB2O95067 398 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 OR2H2O95918 312 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 MOSP00540 346 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 PRKACAP17612 351 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 NPBWR2P48146 333 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 ACTR3P61158 418 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 PITPNAQ00169 270 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 MFGE8Q08431 387 aaPredicted RBP8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 UBE2V2Q15819 145 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 KRBOX4Q5JUW0 171 aa8.94□□□□□ -0.98
AMBRA1-207ENST00000529553 RNLSQ5VYX0 342 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms