RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SYS1Q8N2H4 156 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 CD177Q8N6Q3 437 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 Q8N7P7 452 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ZNRF1Q8ND25 227 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF555Q8NEP9 628 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 OR51A4Q8NGJ6 313 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 OR10AC1Q8NH08 325 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 TRMT10AQ8TBZ6 339 aaKnown RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ADAT3Q96EY9 351 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 B9D2Q9BPU9 175 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 NRIP2Q9BQI9 281 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 PKIBQ9C010 78 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 NXF2Q9GZY0 626 aaKnown RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 SLA2Q9H6Q3 261 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 PLEKHA1Q9HB21 404 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 FGF20Q9NP95 211 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 INPP5EQ9NRR6 644 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 MTCH1Q9NZJ7 389 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 SLC25A10Q9UBX3 287 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 RPL36Q9Y3U8 105 aaKnown RBP6.92□□□□□ -1.3
SSBP3-212ENST00000528930 KPTNQ9Y664 436 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
SSBP3-212ENST00000528930 MDFIC2A0A1B0GVS7 189 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FAM230AA0A1W2PPH8 454 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 NKX6-3A6NJ46 265 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 RFPL4AA6NLU0 287 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 RFPL4AL1F8VTS6 287 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 F8VVB4 439 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 F8VWA3 439 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 J3QRK9 145 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 UPK1BO75841 260 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 GATBO75879 557 aaKnown RBP6.91□□□□□ -1.3
SSBP3-212ENST00000528930 SERPINA3P01011 423 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 GNAO1P09471 354 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 CSF1P09603 554 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 ATF1P18846 271 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 PRDX2P32119 198 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 CEBPDP49716 269 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-212ENST00000528930 GNG2P59768 71 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 BPIFB3P59826 476 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 ACTA2P62736 377 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 ACTG2P63267 376 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 CD69Q07108 199 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 IL24Q13007 206 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 PDCD1Q15116 288 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 GPR157Q5UAW9 335 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 METTL11BQ5VVY1 283 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 CRIP3Q6Q6R5 217 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 UTS2BQ765I0 119 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 VMO1Q7Z5L0 202 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 C8orf59Q8N0T1 100 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-212ENST00000528930 BATF2Q8N1L9 274 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 CNIH3Q8TBE1 160 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 SETD6Q8TBK2 473 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 DYNC2LI1Q8TCX1 351 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 NPRL2Q8WTW4 380 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 PP6455Q8WZ26 134 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 SGCDQ92629 289 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FCGR1BQ92637 280 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FGGYQ96C11 551 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 YIPF6Q96EC8 236 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 BORCS8Q96FH0 119 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 DUSP21Q9H596 190 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 ELL3Q9HB65 397 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-212ENST00000528930 HHLA2Q9UM44 414 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 SLC7A11Q9UPY5 501 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 POLDIP2Q9Y2S7 368 aa6.91□□□□□ -1.3
SSBP3-212ENST00000528930 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 PNMA8CA0A1B0GUJ8 204 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 NOTOA8MTQ0 251 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 NXPH2O95156 264 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 ZFPL1O95159 310 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 IGHV1-69P01742 117 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 NDUFB7P17568 137 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 AZGP1P25311 298 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 RBP2P50120 134 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 ETV1P50549 477 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 ATP1B3P54709 279 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 DLX1P56177 255 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 PROK1P58294 105 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 DEFA1P59665 94 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 DEFA3P59666 94 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 MRPL28Q13084 256 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 CNN3Q15417 329 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 SMIM21Q3B7S5 101 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 SIGIRRQ6IA17 410 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 LAIR2Q6ISS4 152 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 METAP1DQ6UB28 335 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 C1orf122Q6ZSJ8 110 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 RNF144BQ7Z419 303 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 SETD9Q8NE22 299 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 TMEM185AQ8NFB2 350 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms