RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 C13orf42A0A1B0GVH6 325 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 PQLC2LA1A4F0 135 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 OR5B21A6NL26 309 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 TRAPPC2LH3BP13 241 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 SS18L1O75177 396 aaPredicted RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 CNOT4O95628 575 aaKnown RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 IFNA21P01568 189 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 IGHG3P01860 377 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 PSMB6P28072 239 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 RBM11P57052 281 aaKnown RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 CDSNQ15517 529 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 OR2A2Q6IF42 318 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 LINC00596Q86U02 117 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 KCNRGQ8N5I3 272 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 ZNF611Q8N823 705 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 BCL2L2Q92843 193 aaPredicted RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 POM121L2Q96KW2 1035 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 FAAP24Q9BTP7 215 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 ZNF442Q9H7R0 627 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 METTL8Q9H825 291 aaKnown RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 RHOFQ9HBH0 211 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 SPACA1Q9HBV2 294 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 AK3Q9UIJ7 227 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 LIPGQ9Y5X9 500 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 PRRC2AP48634 2157 aaKnown RBP10.09□□□□□ -0.79
USF1-208ENST00000528768 MED12Q93074 2177 aa10.09□□□□□ -0.79
USF1-208ENST00000528768 STAB1Q9NY15 2570 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 IGKV1-27A0A075B6S5 117 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 TEX13DA0A0J9YY54 714 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 EEF1E1-BLOC1S5C9J1V9 151 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 AQP7O14520 342 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 PRRG2O14669 202 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 IFNA2P01563 188 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 FCGR3AP08637 254 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 OR5H8P0DN80 308 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 SELEP16581 610 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 CALCRP30988 508 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 HOXC12P31275 282 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 SERPINF1P36955 418 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 SRSF7Q16629 238 aaKnown RBP eCLIP10.08□□□□□ -0.8
USF1-208ENST00000528768 MPV17LQ2QL34 196 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 ABCA11PQ4W5N1 156 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 DMRTC1Q5HYR2 192 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 NHLRC3Q5JS37 347 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 ELP2Q6IA86 826 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 SLC25A26Q70HW3 274 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 ZNF573Q86YE8 665 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 CCDC71LQ8N9Z2 235 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 Q8NFD4 153 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 PPP1R1CQ8WVI7 109 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 PIK3IP1Q96FE7 263 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 DMRTA2Q96SC8 542 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 SYT3Q9BQG1 590 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 ZNF2Q9BSG1 426 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 GSX1Q9H4S2 264 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 C5orf66Q9H5L9 145 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 C12orf49Q9H741 205 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 CDH20Q9HBT6 801 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 CHMP1AQ9HD42 196 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 SPRR3Q9UBC9 169 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 PFDN2Q9UHV9 154 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 PRSS50Q9UI38 385 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
USF1-208ENST00000528768 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
USF1-208ENST00000528768 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 COL6A5A8TX70 2615 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 PIGBOS1A0A0B4J2F0 54 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 DBX1A6NMT0 343 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 SDCBPO00560 298 aaPredicted RBP10.07□□□□□ -0.8
USF1-208ENST00000528768 BCL2L11O43521 198 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 GLAP06280 429 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 ZNF728P0DKX0 622 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 FGF12P61328 243 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 HERV-K104P61576 105 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 EIF5AP63241 154 aaKnown RBP10.07□□□□□ -0.8
USF1-208ENST00000528768 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 THOC7Q6I9Y2 204 aaKnown RBP10.07□□□□□ -0.8
USF1-208ENST00000528768 DHRS11Q6UWP2 260 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 COMMD7Q86VX2 200 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 PDZD9Q8IXQ8 264 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 SLC30A7Q8NEW0 376 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 ANGPTL6Q8NI99 470 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 PHYHIPLQ96FC7 376 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 C2orf50Q96LR7 162 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 MICU1Q9BPX6 476 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 RTBDNQ9BSG5 229 aaPredicted RBP10.07□□□□□ -0.8
USF1-208ENST00000528768 ZFP57Q9NU63 452 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 MED9Q9NWA0 146 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 GPR160Q9UJ42 338 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms