RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 Q6ZPA2 131 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 Q71RC1 249 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-205ENST00000527046 BPIFB2Q8N4F0 458 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 Q8N7P7 452 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 SUMF2Q8NBJ7 301 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 KCNG3Q8TAE7 436 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 NDNFQ8TB73 568 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 SLC25A46Q96AG3 418 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 TMEM186Q96B77 213 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 POM121Q96HA1 1249 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 SELENOIQ9C0D9 397 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 CHST6Q9GZX3 395 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 DAPK2Q9UIK4 370 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 WNK2Q9Y3S1 2297 aa8.88□□□□□ -0.99
NEDD8-205ENST00000527046 LOC105371242A0A075B767 164 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 IGHV2-70DA0A0C4DH43 119 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 H3BMQ9 156 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 RAB27BO00194 218 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 GPR37O15354 613 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 SOCS1O15524 211 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 MPIG6BO95866 241 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 CSTBP04080 98 aaKnown RBP8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 MMP9P14780 707 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 CHATP28329 748 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 ERP29P30040 261 aaKnown RBP8.87□□□□□ -0.99
NEDD8-205ENST00000527046 GLIPR1P48060 266 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 PAX5Q02548 391 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 SCN1BQ07699 218 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 MPV17LQ2QL34 196 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 RSBN1Q5VWQ0 802 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-205ENST00000527046 NLRC3Q7RTR2 1065 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 OR8H2Q8N162 312 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 GAPTQ8N292 157 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 TPRX1Q8N7U7 411 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 TMEM185AQ8NFB2 350 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 OR4M1Q8NGD0 313 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 ST8SIA4Q92187 359 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 DYRK2Q92630 601 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 SIRPDQ9H106 197 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 PPA2Q9H2U2 334 aa8.87□□□□□ -0.99
NEDD8-205ENST00000527046 KIAA2026Q5HYC2 2103 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 MEX3AA1L020 520 aaKnown RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 NKX6-3A6NJ46 265 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ECDO95905 644 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 CSN2P05814 226 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 HEXAP06865 529 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ZNF44P15621 663 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 SERPINB10P48595 397 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 AESQ08117 197 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ZNF273Q14593 569 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 CR1LQ2VPA4 569 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 LRRC10Q5BKY1 277 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 KLF17Q5JT82 389 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 UTF1Q5T230 341 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 CLEC9AQ6UXN8 241 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 C5orf24Q7Z6I8 188 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ASCC1Q8N9N2 400 aaKnown RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 CHST4Q8NCG5 386 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 OR5D13Q8NGL4 314 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 DYNC2LI1Q8TCX1 351 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 PTX4Q96A99 478 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ISOC1Q96CN7 298 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 S100A13Q99584 98 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 SULT4A1Q9BR01 284 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 NUDT16L1Q9BRJ7 211 aaKnown RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 MRI1Q9BV20 369 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 DPCDQ9BVM2 203 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 DCSTAMPQ9H295 470 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 RAB22AQ9UL26 194 aa8.86□□□□□ -0.99
NEDD8-205ENST00000527046 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
NEDD8-205ENST00000527046 FN1P02751 2386 aaKnown RBP8.85□□□□□ -0.99
NEDD8-205ENST00000527046 MGST3O14880 152 aa8.85□□□□□ -0.99
NEDD8-205ENST00000527046 MMP23AO75900 390 aa8.85□□□□□ -0.99
NEDD8-205ENST00000527046 OR7C1O76099 320 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-205ENST00000527046 FSHBP01225 129 aa8.85□□□□□ -0.99
NEDD8-205ENST00000527046 MT-ND4P03905 459 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms