RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 CA13Q8N1Q1 262 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 FOXB1Q99853 325 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 MAS1LP35410 378 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
LRRK1-202ENST00000525284 PP6455Q8WZ26 134 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 KCNE3Q9Y6H6 103 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 C4AP0C0L4 1744 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 C4BP0C0L5 1744 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 KBTBD11O94819 623 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 MMP9P14780 707 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 ERASQ7Z444 233 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 LEUTXA8MZ59 168 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 TIMP1P01033 207 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM210A6NLX4 147 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 FOXF1Q12946 379 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF324BQ6AW86 544 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 MRGPRX4Q96LA9 322 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 IGHV3-21A0A0B4J1V1 117 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 ADAP1O75689 374 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 Q8WTZ3 238 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 MBPP02686 304 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 LGALSLQ3ZCW2 172 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 C16orf52Q8NHV5 167 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 R3HDM4Q96D70 268 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 SLC25A17O43808 307 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 RRN3P1Q2M238 152 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
LRRK1-202ENST00000525284 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 CD81P60033 236 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 Q7L0L9 218 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 SOSTQ9BQB4 213 aa12.16□□□□□ -0.46
LRRK1-202ENST00000525284 FAM181BA6NEQ2 426 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 CHST1O43916 411 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 MPDU1O75352 247 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
LRRK1-202ENST00000525284 CDX2Q99626 313 aaPredicted RBP12.15□□□□□ -0.46
LRRK1-202ENST00000525284 FGF20Q9NP95 211 aaPredicted RBP12.15□□□□□ -0.46
LRRK1-202ENST00000525284 SHISA8B8ZZ34 492 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 NPIPB6E9PJ23 425 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 IL4P05112 153 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 CEACAM3P40198 252 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 PPICP45877 212 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 PNLIPRP2P54317 469 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 OR2V1Q8NHB1 315 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 GMPPAQ96IJ6 420 aaPredicted RBP12.15□□□□□ -0.46
LRRK1-202ENST00000525284 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 LNP1A1A4G5 178 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 MFAP2P55001 183 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 OR11G2Q8NGC1 345 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 MOSPD3O75425 235 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
LRRK1-202ENST00000525284 C7orf71A4D174 169 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 K7EQS6 105 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 SPINK2P20155 84 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 SELENOPP49908 381 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 INSL4Q14641 139 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 KHDC3LQ587J8 217 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 SPSB1Q96BD6 273 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 CLEC1BQ9P126 229 aa12.15□□□□□ -0.47
LRRK1-202ENST00000525284 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 LAMB4A4D0S4 1761 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 F2RL2O00254 374 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 RECKO95980 971 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 DEFB103AP81534 67 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 GVQW1Q8N7I0 195 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 A0A1B0GV90 55 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 hADV38S2A0JD32 116 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF98A6NK75 572 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 FAM90A27PA6NNH2 459 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 GP1BAP07359 652 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF865P0CJ78 1059 aaPredicted RBP12.14□□□□□ -0.47
LRRK1-202ENST00000525284 MDH2P40926 338 aaKnown RBP12.14□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF117Q03924 483 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 MORN4Q8NDC4 146 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 PRDM14Q9GZV8 571 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 FAM74A7A6NL05 159 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 IGF2P01344 180 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 CRHP06850 196 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 FCGR2BP31994 310 aaPredicted RBP12.14□□□□□ -0.47
LRRK1-202ENST00000525284 OR4S2Q8NH73 311 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms