RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OGG1O15527 345 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GPR137BO60478 399 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 SC5DO75845 299 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 SULT1C4O75897 302 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 FADS2O95864 444 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 IGHV3-13P01766 116 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 HLA-DPB1P04440 258 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR4A8P0C604 315 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 LYNX1P0DP58 116 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF19P17023 458 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CCL1P22362 96 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DCKP27707 260 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 HSD11B1P28845 292 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GLRXP35754 106 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 TGFBR1P36897 503 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 TGFBR2P37173 567 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PEX19P40855 299 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GUCA1AP43080 201 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GDI2P50395 445 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 FABP6P51161 128 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 RIDAP52758 137 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GABARAPL2P60520 117 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GRB2P62993 217 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ACTC1P68032 377 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ACTA1P68133 377 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 EMX1Q04741 257 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 MED21Q13503 144 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CDK5R1Q15078 307 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR8B8Q15620 311 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 SSX1Q16384 188 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 RBM48Q5RL73 367 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 RNLSQ5VYX0 342 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DMKNQ6E0U4 476 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR2T2Q6IF00 324 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DEGS2Q6QHC5 323 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DRAM2Q6UX65 266 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PAMR1Q6UXH9 720 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 FBXW12Q6X9E4 464 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 Q6ZSR3 168 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PRSS48Q7RTY5 328 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DPPA2Q7Z7J5 298 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 WDR86Q86TI4 376 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ELMOD2Q8IZ81 293 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 SYS1Q8N2H4 156 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 MUC15Q8N387 334 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 STX19Q8N4C7 294 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF283Q8N7M2 679 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF611Q8N823 705 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 YIPF7Q8N8F6 280 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 BHLHE23Q8NDY6 225 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR10AD1Q8NGE0 317 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR56B2PQ8NGI1 322 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR2G2Q8NGZ5 317 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR52N1Q8NH53 320 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR2T6Q8NHC8 308 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR51E1Q8TCB6 317 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 HPSE2Q8WWQ2 592 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ASB17Q8WXJ9 295 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 MRPL24Q96A35 216 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CMBLQ96DG6 245 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ADAT3Q96EY9 351 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 REEP6Q96HR9 211 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CYYR1Q96J86 154 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 FAM71F1Q96KD3 344 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 LURAP1Q96LR2 239 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 Q96MT0 163 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OPALINQ96PE5 141 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 NKX3-1Q99801 234 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CDCA4Q9BXL8 241 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 MROQ9BYG7 248 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PPIL3Q9H2H8 161 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 TPK1Q9H3S4 243 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PLK3Q9H4B4 646 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF442Q9H7R0 627 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 NIPAL2Q9H841 368 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CDH20Q9HBT6 801 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ACOT13Q9NPJ3 140 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GPR84Q9NQS5 396 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DCAF16Q9NXF7 216 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 NUFIP1Q9UHK0 495 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PURGQ9UJV8 347 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 GNG8Q9UK08 70 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR52A1Q9UKL2 312 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PLEKHA6Q9Y2H5 1048 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CAB39Q9Y376 341 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 EXOSC1Q9Y3B2 195 aaKnown RBP2.42□□□□□ -2.02
CSDE1-208ENST00000524652 N6AMT1Q9Y5N5 214 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CACNG2Q9Y698 323 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 V9GYS6 101 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ABCA1O95477 2261 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 IGKV1-27A0A075B6S5 117 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 IGKV1-9A0A0C4DH69 117 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 TRBV5-5A0A0J9YX44 114 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 A0A0U1RQV5 110 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 A0A1W2PPK0 400 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 ACOD1A6NK06 481 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 SNTNA6NMZ2 147 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 CD300LBA8K4G0 201 aa2.41□□□□□ -2.02
CSDE1-208ENST00000524652 F5H5P2 479 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms