RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 A0A1W2PPE2 198 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 A0A1W2PR64 198 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 A0A1W2PRV1 198 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A8PA6NJQ4 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A22PA8MWA6 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 SIRPB1O00241 398 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 DEGS1O15121 323 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 HTR3BO95264 441 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 CALCBP10092 127 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 PSMB9P28065 219 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
SF3B2-202ENST00000524475 DLX6P56179 175 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 P2RX3P56373 397 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 SLC22A6Q4U2R8 563 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 AWAT2Q6E213 333 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 GLIPR1L1Q6UWM5 242 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 C11orf42Q8N5U0 333 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 OR4S1Q8NGB4 309 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 OR10K1Q8NGX5 313 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 NKX3-1Q99801 234 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-202ENST00000524475 PRDM13Q9H4Q3 707 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 ZNF696Q9H7X3 374 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 ST3GAL6Q9Y274 331 aa12.4□□□□□ -0.42
SF3B2-202ENST00000524475 TRAV1-2A0A0B4J238 106 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 TRAV24A0A0B4J272 114 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 IGHV1-69DA0A0B4J2H0 117 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 SLC22A1O15245 554 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 IGHV1-69P01742 117 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 SERPINA2P20848 420 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 CALRP27797 417 aaKnown RBP12.39□□□□□ -0.43
SF3B2-202ENST00000524475 CFPP27918 469 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 FGF9P31371 208 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-202ENST00000524475 PSMD7P51665 324 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 EDDM3BP56851 147 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 HILS1P60008 231 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 ZNF273Q14593 569 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 PIGYQ3MUY2 71 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 TCF23Q7RTU1 214 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 OR4M1Q8NGD0 313 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 CORO2AQ92828 525 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 JMJD8Q96S16 334 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 MS4A7Q9GZW8 240 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-202ENST00000524475 CHST6Q9GZX3 395 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 SPACA1Q9HBV2 294 aa12.39□□□□□ -0.43
SF3B2-202ENST00000524475 UBE2J1Q9Y385 318 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-202ENST00000524475 A0A087WXM4 84 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 H3BUI4 141 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 ZNF728P0DKX0 622 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 UBE2E1P51965 193 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 ZFAND2BQ8WV99 257 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 COQ2Q96H96 371 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 CST11Q9H112 138 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
SF3B2-202ENST00000524475 RCC2Q9P258 522 aaKnown RBP12.38□□□□□ -0.43
SF3B2-202ENST00000524475 A0A1W2PP11 408 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 RNASEK-C17orf49H0YIS7 233 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 SLC17A2O00624 439 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 GEMIN2O14893 280 aaKnown RBP12.37□□□□□ -0.43
SF3B2-202ENST00000524475 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-202ENST00000524475 BPNT1O95861 308 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 GLAP06280 429 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 MGMTP16455 207 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 HTR2CP28335 458 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 ERVFRD-1P60508 538 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 SCN1BQ07699 218 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 EDDM3AQ14507 147 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 PAN3Q58A45 887 aaKnown RBP12.37□□□□□ -0.43
SF3B2-202ENST00000524475 TSPAN14Q8NG11 270 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 Q96M66 194 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 NR1H4Q96RI1 486 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-202ENST00000524475 GFI1Q99684 422 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 PPA2Q9H2U2 334 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 ZMAT3Q9HA38 289 aaKnown RBP12.37□□□□□ -0.43
SF3B2-202ENST00000524475 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 TAS2R3Q9NYW6 316 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 STUB1Q9UNE7 303 aa12.37□□□□□ -0.43
SF3B2-202ENST00000524475 TRGV10A0A0A0MS01 117 aa12.36□□□□□ -0.43
SF3B2-202ENST00000524475 ODAMA1E959 279 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms