RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 LIAT1Q6ZQX7 453 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 OR1S2Q8NGQ3 325 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 GLYATL2Q8WU03 294 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 TMED6Q8WW62 240 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 ARID1AO14497 2285 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 OTOGLQ3ZCN5 2332 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 DEDDO75618 318 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 HOXD4P09016 255 aaPredicted RBP22■■□□□ 1.11
COL13A1-213ENST00000520267 SCTP09683 121 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 LRTM2Q8N967 370 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 MSI2Q96DH6 328 aaKnown RBP22■■□□□ 1.11
COL13A1-213ENST00000520267 C18orf12Q96KH6 178 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 SYT3Q9BQG1 590 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 OR2S2Q9NQN1 319 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 LSM5Q9Y4Y9 91 aaKnown RBP22■■□□□ 1.11
COL13A1-213ENST00000520267 ZNF14P17017 642 aaPredicted RBP21.99■■□□□ 1.11
COL13A1-213ENST00000520267 IGHV1-2P23083 117 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 GNG3P63215 75 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 NEK7Q8TDX7 302 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 MS4A7Q9GZW8 240 aaPredicted RBP21.99■■□□□ 1.11
COL13A1-213ENST00000520267 FAM86C1Q9NVL1 165 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 CLCF1Q9UBD9 225 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 PCDHB10Q9UN67 800 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 OR5B21A6NL26 309 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 LRP3O75074 770 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 SCGB1D2O95969 90 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 IGHG3P01860 377 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 SRSF7Q16629 238 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL13A1-213ENST00000520267 ZNF573Q86YE8 665 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 ASF1BQ9NVP2 202 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 LHX6Q9UPM6 363 aa21.99■■□□□ 1.11
COL13A1-213ENST00000520267 TBC1D28Q2M2D7 210 aa21.98■■□□□ 1.11
COL13A1-213ENST00000520267 C17orf78Q8N4C9 275 aa21.98■■□□□ 1.11
COL13A1-213ENST00000520267 TRIB1Q96RU8 372 aa21.98■■□□□ 1.11
COL13A1-213ENST00000520267 TMEM100Q9NV29 134 aa21.98■■□□□ 1.11
COL13A1-213ENST00000520267 BET1O15155 118 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 PHF1O43189 567 aaPredicted RBP21.97■■□□□ 1.11
COL13A1-213ENST00000520267 NOVA1P51513 510 aaKnown RBP21.97■■□□□ 1.11
COL13A1-213ENST00000520267 CCDC71LQ8N9Z2 235 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 LHFPL5Q8TAF8 219 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 TP53RKQ96S44 253 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 PRRX2Q99811 253 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 ZC4H2Q9NQZ6 224 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 H7C1Q1 480 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 RHBDL1O75783 438 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 RPL12P30050 165 aaKnown RBP21.97■■□□□ 1.11
COL13A1-213ENST00000520267 SMCO1Q147U7 214 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 HERPUD1Q15011 391 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 SUMF2Q8NBJ7 301 aa21.97■■□□□ 1.11
COL13A1-213ENST00000520267 LYZL6O75951 148 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 MBPP02686 304 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-213ENST00000520267 GNRHRP30968 328 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 IL24Q13007 206 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 RPL7L1Q6DKI1 246 aaKnown RBP21.96■■□□□ 1.11
COL13A1-213ENST00000520267 LGI3Q8N145 548 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 OR51I2Q9H344 312 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 K7EPK0 472 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 SIGLEC5O15389 551 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 FAM157CP0CG43 387 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 FAM71E2Q8N5Q1 922 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 SPERTQ8NA61 448 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 RNF141Q8WVD5 230 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 PLK3Q9H4B4 646 aa21.96■■□□□ 1.11
COL13A1-213ENST00000520267 HS3ST1O14792 307 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 IGFL2Q6UWQ7 119 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 FAM58AQ8N1B3 248 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 BPIFCQ8NFQ6 507 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 MARC2Q969Z3 335 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 GLRX2Q9NS18 164 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 MPPED1O15442 326 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 SMPD2O60906 423 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 DIRAS3O95661 229 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 IDH3GP51553 393 aaPredicted RBP21.95■■□□□ 1.1
COL13A1-213ENST00000520267 UBE2NP61088 152 aaKnown RBP21.95■■□□□ 1.1
COL13A1-213ENST00000520267 ERVS71-1P61550 626 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 FBXW12Q6X9E4 464 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 PKIBQ9C010 78 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 PIGMQ9H3S5 423 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 SPEF1Q9Y4P9 236 aa21.95■■□□□ 1.1
COL13A1-213ENST00000520267 IGKV1-6A0A0C4DH72 117 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 TRDCB7Z8K6 153 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 TAAR5O14804 337 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 TK1P04183 234 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 KCNJ3P48549 501 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 C20orf204Q6ZNR8 217 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 FAM214BQ7L5A3 538 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 LINC00596Q86U02 117 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 OR52M1Q8NGK5 317 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 RDH5Q92781 318 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 OR2J1Q9GZK6 312 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 LOC400499M0QZD8 3231 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 TRAV24A0A0B4J272 114 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 C3orf85A0A1B0GTC6 90 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 RCC1P18754 421 aaPredicted RBP21.94■■□□□ 1.1
COL13A1-213ENST00000520267 MRPL30Q8TCC3 161 aaKnown RBP21.94■■□□□ 1.1
COL13A1-213ENST00000520267 SECTM1Q8WVN6 248 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 AMDHD2Q9Y303 409 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 ATP23Q9Y6H3 246 aa21.94■■□□□ 1.1
COL13A1-213ENST00000520267 PPP1CBP62140 327 aa21.93■■□□□ 1.1
COL13A1-213ENST00000520267 TGFBR3Q03167 851 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms