RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 TACSTD2P09758 323 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 CFL1P23528 166 aaKnown RBP5.65□□□□□ -1.5
SDCBP-208ENST00000520228 ATP6V1E1P36543 226 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 RIPPLY3P57055 190 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF121P58317 390 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-208ENST00000520228 GABPB1Q06547 395 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-208ENST00000520228 TRIP10Q15642 601 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 OR4A47Q6IF82 309 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 LRRN1Q6UXK5 716 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 KRT77Q7Z794 578 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 OR10AD1Q8NGE0 317 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 OR2AE1Q8NHA4 323 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 OCC1Q8TAD7 63 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 FAM81AQ8TBF8 368 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 TRUB1Q8WWH5 349 aaKnown RBP5.65□□□□□ -1.5
SDCBP-208ENST00000520228 RAB1CQ92928 201 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 TIMD4Q96H15 378 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 SLC29A1Q99808 456 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 ASCL2Q99929 193 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 SLC30A2Q9BRI3 323 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 MROQ9BYG7 248 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 BARHL1Q9BZE3 327 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 NIPAL2Q9H841 368 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 YAE1D1Q9NRH1 226 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 TREM2Q9NZC2 230 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 DNAJC27Q9NZQ0 273 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 WARS2Q9UGM6 360 aaKnown RBP5.65□□□□□ -1.5
SDCBP-208ENST00000520228 IL19Q9UHD0 177 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 KLHDC2Q9Y2U9 406 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 CACNG2Q9Y698 323 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 TMEM14AQ9Y6G1 99 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 HIVEP2P31629 2446 aa5.65□□□□□ -1.51
SDCBP-208ENST00000520228 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-208ENST00000520228 CLDN25C9JDP6 229 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ANKRD65E5RJM6 399 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 F5H5P2 479 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 H0YL77 283 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 XRCC2O43543 280 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF254O75437 659 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 APOHP02749 345 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-208ENST00000520228 HLA-DPB1P04440 258 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 HTR1FP30939 366 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 DDOSTP39656 456 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SRP9P49458 86 aaKnown RBP5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SLC3A1Q07837 685 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 OR8G1Q15617 311 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 MRGPRG-AS1Q2M3A8 158 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SPRNQ5BIV9 151 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ADAMTSL4-AS1Q5T5F5 129 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 AVPI1Q5T686 147 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 DEGS2Q6QHC5 323 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF322Q6U7Q0 402 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-208ENST00000520228 FAM219AQ8IW50 185 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SLC35F2Q8IXU6 374 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF679Q8IYX0 411 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 OR51G2Q8NGK0 314 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 OR13C3Q8NGS6 347 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ITLN1Q8WWA0 313 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SGK3Q96BR1 496 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 REEP6Q96HR9 211 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 OR2V2Q96R30 315 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 MBOAT4Q96T53 435 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 SLC22A4Q9H015 551 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 RGCCQ9H4X1 137 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 NARFLQ9H6Q4 476 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 CLN6Q9NWW5 311 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF319Q9P2F9 582 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 IKZF2Q9UKS7 526 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 PPP1R3CQ9UQK1 317 aa5.64□□□□□ -1.51
SDCBP-208ENST00000520228 NOP16Q9Y3C1 178 aaKnown RBP5.64□□□□□ -1.51
SDCBP-208ENST00000520228 RTTNQ86VV8 2226 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 NAV3Q8IVL0 2385 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 IGHV3-64DA0A0J9YX35 117 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM269A0A1B0GVZ9 245 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 A0A1B0GWJ7 208 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 MEIOCA2RUB1 952 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ACOD1A6NK06 481 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 LRRC30A6NM36 301 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ANKRD30BLA7E2S9 258 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 E9PQ18 207 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF670-ZNF695F2Z2N8 137 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 PHYHO14832 338 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 MLNRO43193 412 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 GMDSO60547 372 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ENTPD6O75354 484 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 TGFAP01135 160 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 SBK2P0C263 348 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 ANPEPP15144 967 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 IL2RGP31785 369 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 RIDAP52758 137 aaKnown RBP5.63□□□□□ -1.51
SDCBP-208ENST00000520228 CXCR4P61073 352 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 SNRPGP62308 76 aaKnown RBP5.63□□□□□ -1.51
SDCBP-208ENST00000520228 FAM3AP98173 230 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 TMED1Q13445 227 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 RCN1Q15293 331 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 SLC25A30Q5SVS4 291 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 C6orf52Q5T4I8 152 aa5.63□□□□□ -1.51
SDCBP-208ENST00000520228 MEDAGQ5VYS4 303 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms