RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 CCL20P78556 96 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 TRA2AQ13595 282 aaKnown RBP eCLIP7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 FAM76BQ5HYJ3 339 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 AVPI1Q5T686 147 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 SP5Q6BEB4 398 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 FIP1L1Q6UN15 594 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 FBXW12Q6X9E4 464 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 MEX3BQ6ZN04 569 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 C20orf204Q6ZNR8 217 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 HSD17B11Q8NBQ5 300 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 PLPPR1Q8TBJ4 325 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 HIST1H2BAQ96A08 127 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 RGCCQ9H4X1 137 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF286AQ9HBT8 521 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 POMT1Q9Y6A1 747 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 A0A096LPE4 126 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 C3orf85A0A1B0GTC6 90 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 A0A1W2PPE3 182 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 A0A1W2PPZ6 126 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 LILRA1O75019 489 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 NAPSAO96009 420 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF44P15621 663 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 ZXDAP98168 799 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 MALLQ13021 153 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 IGFBP7Q16270 282 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 GUK1Q16774 197 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 AKIRIN2Q53H80 203 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 SLAMF9Q96A28 289 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 ISOC2Q96AB3 205 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 HES7Q9BYE0 225 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 TMEM222Q9H0R3 208 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 FAM212BQ9NTI7 297 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 MTCH1Q9NZJ7 389 aa7.26□□□□□ -1.25
CTNNA1-210ENST00000518825 CCDC163A0A0D9SF12 145 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 FAM24AA6NFZ4 105 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 PROB1E7EW31 1015 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 GLAP06280 429 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 FOLR2P14207 255 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 EPHA1P21709 976 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 AKR1D1P51857 326 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 EWSR1Q01844 656 aaKnown RBP eCLIP7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF616Q08AN1 781 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 AWAT1Q58HT5 328 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 GPR157Q5UAW9 335 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 TBC1D26Q86UD7 250 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 WDR5BQ86VZ2 330 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 LGI3Q8N145 548 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 SUMF1Q8NBK3 374 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 OR56B2PQ8NGI1 322 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 SIGLEC12Q96PQ1 595 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 C20orf24Q9BUV8 137 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 GLRX2Q9NS18 164 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 C19orf12Q9NSK7 152 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF391Q9UJN7 358 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 SMG1Q96Q15 3661 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF724A8MTY0 619 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 RPL36A-HNRNPH2H7BZ11 118 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 K7N7A8 449 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 SS18L1O75177 396 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 TSPAN15O95858 294 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 NGFP01138 241 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 HLA-HP01893 362 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 PAX6P26367 422 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 POLR2GP62487 172 aaKnown RBP eCLIP7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 IL13RA2Q14627 380 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 TSC22D1Q15714 1073 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 EXTL1Q92935 676 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 C14orf79Q96F83 325 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 TMEM56Q96MV1 263 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 C12orf57Q99622 126 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 RARRES2Q99969 163 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF442Q9H7R0 627 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 Q9N2K0 584 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 SLC7A11Q9UPY5 501 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 TMEM56-RWDD3S4R434 201 aa7.25□□□□□ -1.25
CTNNA1-210ENST00000518825 A0A1B0GV50 99 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 C7orf77A4D0Y5 90 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 ST8SIA3O43173 380 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 NEURL1O76050 574 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 GDF1P27539 372 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 GPM6AP51674 278 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 ARF1P84077 181 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 Q6ZS49 121 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 SELENOHQ8IZQ5 122 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 ZNF295-AS1Q8N0V1 137 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 GAPTQ8N292 157 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 CT55Q8WUE5 264 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 A0A1W2PNU3 283 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 SLC22A20A6NK97 555 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 TRDCB7Z8K6 153 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 HSPB6O14558 160 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 EIF3GO75821 320 aaKnown RBP eCLIP7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 PMELP40967 661 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 HAAOP46952 286 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 LHX2P50458 406 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 CTAG1AP78358 180 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 PRDX4Q13162 271 aa7.24□□□□□ -1.25
CTNNA1-210ENST00000518825 SWI5Q1ZZU3 235 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms