RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ACTA1P68133 377 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 GAGE1Q13065 139 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 KLRD1Q13241 179 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 IRF3Q14653 427 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RAB11BQ15907 218 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 TCTEX1D4Q5JR98 221 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 OTPQ5XKR4 325 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ZNF826PQ6ZT77 177 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 SSX9Q7RTT3 188 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 LINC00346Q8IVM7 164 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 SPAG16Q8N0X2 631 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 CCDC197Q8NCU1 140 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 SLC7A13Q8TCU3 470 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 MRGPRDQ8TDS7 321 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 TMEM239Q8WW34 195 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RORBQ92753 470 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 STMN2Q93045 179 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RRNAD1Q96FB5 475 aaKnown RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 GPHA2Q96T91 129 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ZNF2Q9BSG1 426 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ALKBH7Q9BT30 221 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 COPS4Q9BT78 406 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 DCTN5Q9BTE1 182 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 FNDC11Q9BVV2 318 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 POLR2J2Q9GZM3 115 aaKnown RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 WDR76Q9H967 626 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 SIRT7Q9NRC8 400 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RIMS3Q9UJD0 308 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 HSF4Q9ULV5 492 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 PRPF19Q9UMS4 504 aaKnown RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ANGPT4Q9Y264 503 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 HERC2O95714 4834 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 C13orf42A0A1B0GVH6 325 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 PRSS37A4D1T9 235 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 NKX6-3A6NJ46 265 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FAM25AB3EWG3 89 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FAM25CB3EWG5 89 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FAM25GB3EWG6 89 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 H7C1C5 153 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 M0R1W7 72 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 IMPA2O14732 288 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 IFNA4P05014 189 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 ACSM4P0C7M7 580 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 CA6P23280 308 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 MAS1LP35410 378 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 RPS19P39019 145 aaKnown RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 GUCA1AP43080 201 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 EIF2B2P49770 351 aaKnown RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 LCN6P62502 163 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 SELPLGQ14242 412 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 LY6EQ16553 131 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 PSG3Q16557 428 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 LRRC75BQ2VPJ9 315 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 C19orf54Q5BKX5 351 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 MESTQ5EB52 335 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 WDR38Q5JTN6 314 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 CASC10Q5T4H9 136 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 PRAMEF5Q5TYX0 476 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 NAA40Q86UY6 237 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 TMEM17Q86X19 198 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 ADGRG5Q8IZF4 528 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 CMTM4Q8IZR5 234 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 ZNF561Q8N587 486 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 C11orf42Q8N5U0 333 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 OR5D18Q8NGL1 313 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 OR8J1Q8NGP2 316 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 SNX22Q96L94 193 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 DDOQ99489 341 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 C12orf57Q99622 126 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 SEC22CQ9BRL7 303 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 CDCA4Q9BXL8 241 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FAM234AQ9H0X4 552 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 KAT8Q9H7Z6 458 aaKnown RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 PNRC2Q9NPJ4 139 aaKnown RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 INPP5EQ9NRR6 644 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 CLEC5AQ9NY25 188 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 RHCGQ9UBD6 479 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 ABCD2Q9UBJ2 740 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 SLC22A13Q9Y226 551 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 LHFPL6Q9Y693 200 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 U3KQK5 164 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
PABPC1-207ENST00000518716 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
PABPC1-207ENST00000518716 IGHV3OR15-7A0A075B7D8 119 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 LCE6AA0A183 80 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 A0A1W2PRD5 423 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 A0A1W2PRF3 423 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 A0A1W2PRM7 423 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 CD300LBA8K4G0 201 aa4.81□□□□□ -1.64
PABPC1-207ENST00000518716 TMEM238C9JI98 176 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms