RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 OTULINQ96BN8 352 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 GAFA1Q96PS6 74 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 MICU1Q9BPX6 476 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 RTL8AQ9BWD3 113 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SYT4Q9H2B2 425 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 RERGLQ9H628 205 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 DCLRE1BQ9H816 532 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 NMNAT1Q9HAN9 279 aaPredicted RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 VNN3Q9NY84 501 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 C13orf42A0A1B0GVH6 325 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 OR2AT4A6NND4 320 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 ODF3BA8MYP8 253 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 EFCAB9A8MZ26 197 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 CCL24O00175 119 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SLC1A7O00341 560 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 UBDO15205 165 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 OR2F2O95006 317 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 IFNA14P01570 189 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 IFNA6P05013 189 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 PAX6P26367 422 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 GABRA2P47869 451 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 CEBPDP49716 269 aaPredicted RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 RAB13P51153 203 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 RAB25P57735 213 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SLC34A1Q06495 639 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 IFFO1Q0D2I5 559 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 ABCA11PQ4W5N1 156 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 MESTQ5EB52 335 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 LHFPL4Q7Z7J7 247 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 RBM45Q8IUH3 476 aaKnown RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 NKAIN4Q8IVV8 208 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 CSNK2A3Q8NEV1 391 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 OR11H6Q8NGC7 330 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 OR4Q3Q8NH05 313 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 OR51A7Q8NH64 312 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SORT1Q99523 831 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 TM2D3Q9BRN9 247 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 GON7Q9BXV9 100 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SP140LQ9H930 580 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SLC35D1Q9NTN3 355 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 SLC25A37Q9NYZ2 338 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 VAPAQ9P0L0 249 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 LGALS13Q9UHV8 139 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 RIMS3Q9UJD0 308 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 STRAPQ9Y3F4 350 aaKnown RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
CCDC6-203ENST00000518638 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
CCDC6-203ENST00000518638 TRAV27A0A087WT01 109 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 TRBV2A0A0J9YWF9 115 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 CDIPTO14735 213 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 TYROBPO43914 113 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 IGHV1-8P0DP01 117 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 GLRA1P23415 457 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 MPZP25189 248 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 SLC6A6P31641 620 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OTX1P32242 354 aaPredicted RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR3A4PP47883 348 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 MRPL19P49406 292 aaKnown RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 CSNK2BP67870 215 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 DYNC1I2Q13409 638 aaKnown RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 SNAI3Q3KNW1 292 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 ZBED5Q49AG3 693 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 AGBL2Q5U5Z8 902 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 CORO6Q6QEF8 472 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 FAM122BQ7Z309 247 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 MSRB3Q8IXL7 192 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 C11orf53Q8IXP5 236 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF561Q8N587 486 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 NEXN-AS1Q8NBZ9 246 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR5T2Q8NGG2 359 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR4D11Q8NGI4 311 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR9I1Q8NGQ6 314 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR2AE1Q8NHA4 323 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 NDNFQ8TB73 568 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 ANP32BQ92688 251 aaKnown RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 STMN2Q93045 179 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 PRRC1Q96M27 445 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 Q96M85 177 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 TXN2Q99757 166 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 SLC25A33Q9BSK2 321 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 ROPN1BQ9BZX4 212 aaPredicted RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 C20orf27Q9GZN8 174 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 ROPN1Q9HAT0 212 aaPredicted RBP4.77□□□□□ -1.65
CCDC6-203ENST00000518638 C19orf12Q9NSK7 152 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 OR6C3Q9NZP0 311 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 RNF150Q9ULK6 438 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 GPR132Q9UNW8 380 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 SH3GLB1Q9Y371 365 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 MPC1Q9Y5U8 109 aa4.77□□□□□ -1.65
CCDC6-203ENST00000518638 MAGEA13PA6NCF6 341 aa4.76□□□□□ -1.65
CCDC6-203ENST00000518638 C17orf98A8MV24 154 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms