RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 NANPQ8TBE9 248 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 LHX4Q969G2 390 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 SLC25A28Q96A46 364 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
C8orf88-201ENST00000517562 OR7C1O76099 320 aaPredicted RBP12.89□□□□□ -0.35
C8orf88-201ENST00000517562 MPIG6BO95866 241 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 CD37P11049 281 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 MMP9P14780 707 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 MGMTP16455 207 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 HTR2CP28335 458 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
C8orf88-201ENST00000517562 PLA2G7Q13093 441 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 ATXN7L3Q14CW9 347 aaPredicted RBP12.89□□□□□ -0.35
C8orf88-201ENST00000517562 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
C8orf88-201ENST00000517562 ATAD3CQ5T2N8 411 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 METTL11BQ5VVY1 283 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 BRD3OSQ6XYD6 125 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 VMO1Q7Z5L0 202 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 NR2C2APQ86WQ0 139 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 PNKDQ8N490 385 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 C8orf46Q8TAG6 207 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 TBC1D15Q8TC07 691 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 CENPOQ9BU64 300 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 FAM234AQ9H0X4 552 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 RHOFQ9HBH0 211 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 V9GY05 133 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 NF1P21359 2839 aa12.89□□□□□ -0.35
C8orf88-201ENST00000517562 TRAV1-2A0A0B4J238 106 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 TRAV40A0A0B4J280 105 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 TRIM64CA6NLI5 447 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 GPR37O15354 613 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 FSHBP01225 129 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 FAM157CP0CG43 387 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
C8orf88-201ENST00000517562 GTF2F2P13984 249 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
C8orf88-201ENST00000517562 MYL9P24844 172 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 LMO1P25800 156 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 MXD1Q05195 221 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 OR51D1Q8NGF3 324 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 OR5D13Q8NGL4 314 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
C8orf88-201ENST00000517562 YIPF6Q96EC8 236 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 COQ2Q96H96 371 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
C8orf88-201ENST00000517562 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
C8orf88-201ENST00000517562 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 SLC17A2O00624 439 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 MGST3O14880 152 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 SLC22A1O15245 554 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 RAB3BP20337 219 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 EPHA1P21709 976 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 SDC2P34741 201 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 BMXP51813 675 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 UNC119Q13432 240 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 GPR176Q14439 515 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 RAB11BQ15907 218 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 C2orf76Q3KRA6 126 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 SLC6A7Q99884 636 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
C8orf88-201ENST00000517562 UBE2QL1A1L167 161 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
C8orf88-201ENST00000517562 DLX6P56179 175 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 QRFPP83859 136 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 KRBOX4Q5JUW0 171 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 BAIAP2L2Q6UXY1 529 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 ZNF782Q6ZMW2 699 aaPredicted RBP12.86□□□□□ -0.35
C8orf88-201ENST00000517562 OR6M1Q8NGM8 313 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 DYRK2Q92630 601 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
C8orf88-201ENST00000517562 KIF25Q9UIL4 384 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 NUP50Q9UKX7 468 aa12.86□□□□□ -0.35
C8orf88-201ENST00000517562 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 A0A0A6YYD4 124 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 RNASEK-C17orf49H0YIS7 233 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 PDCD5O14737 125 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
C8orf88-201ENST00000517562 MMP23AO75900 390 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 P2RX3P56373 397 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
C8orf88-201ENST00000517562 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms