RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CORO2AQ92828 525 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 RDH12Q96NR8 316 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 NR1H4Q96RI1 486 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-215ENST00000515516 PDCD1LG2Q9BQ51 273 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 SMPD3Q9NY59 655 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-215ENST00000515516 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 ODAMA1E959 279 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 ALDOBP05062 364 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 MYL12AP19105 171 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 DCKP27707 260 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 BRS3P32247 399 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 PTGFRP43088 359 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 GLIPR1P48060 266 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 SOX2P48431 317 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 PRRX1P54821 245 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 MED21Q13503 144 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 ZSCAN26Q16670 478 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 CCDC58Q4VC31 144 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 PRAMEF5Q5TYX0 476 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 RPL22L1Q6P5R6 122 aaKnown RBP11.02□□□□□ -0.65
TCOF1-215ENST00000515516 HEPN1Q6WQI6 88 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 GPR148Q8TDV2 347 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 CREB3L1Q96BA8 519 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 FAM192AQ9GZU8 254 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-215ENST00000515516 CHCHD3Q9NX63 227 aaKnown RBP11.02□□□□□ -0.65
TCOF1-215ENST00000515516 OR6C3Q9NZP0 311 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 DPM3Q9P2X0 92 aa11.02□□□□□ -0.65
TCOF1-215ENST00000515516 LEUTXA8MZ59 168 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 H0YJX3 145 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 SLC33A1O00400 549 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-215ENST00000515516 MMP23AO75900 390 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 CSN2P05814 226 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 CEACAM3P40198 252 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 GTF2A1P52655 376 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-215ENST00000515516 ZP1P60852 638 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 PPP3R1P63098 170 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 ATXN7L3Q14CW9 347 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-215ENST00000515516 RSU1Q15404 277 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 LDLRAD2Q5SZI1 272 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 Q6P435 159 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-215ENST00000515516 RNF144BQ7Z419 303 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF565Q8N9K5 539 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 PXT1Q8NFP0 134 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 TNFAIP8L1Q8WVP5 186 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 APH1BQ8WW43 257 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 AKR1E2Q96JD6 320 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF649Q9BS31 505 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 JAM3Q9BX67 310 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 BARHL1Q9BZE3 327 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
TCOF1-215ENST00000515516 MEGF11A6BM72 1044 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF729A6NN14 1252 aaPredicted RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 HSPB6O14558 160 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 FBXO24O75426 580 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 LIMS3P0CW19 117 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 LIMS4P0CW20 117 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 C21orf33P30042 268 aaPredicted RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 VDAC2P45880 294 aaPredicted RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 BDH1Q02338 343 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 EMX1Q04741 257 aaPredicted RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 HABP2Q14520 560 aaPredicted RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 SMN1Q16637 294 aaKnown RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 PAN3Q58A45 887 aaKnown RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 TTC23Q5W5X9 447 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 ELP2Q6IA86 826 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 Q8N2B8 174 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 SETD9Q8NE22 299 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 OR4P4Q8NGL7 312 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 CYGBQ8WWM9 190 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 CFHR4Q92496 578 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 S100A13Q99584 98 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 C8orf4Q9NR00 106 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 TAS2R4Q9NYW5 299 aa11□□□□□ -0.65
TCOF1-215ENST00000515516 EXOSC1Q9Y3B2 195 aaKnown RBP11□□□□□ -0.65
TCOF1-215ENST00000515516 MEIKINA0A087WXM9 373 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 FAM172BPA6NC97 362 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 WBP4O75554 376 aaKnown RBP10.99□□□□□ -0.65
TCOF1-215ENST00000515516 HTR3BO95264 441 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 NFYBP25208 207 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 MNDAP41218 407 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 GLP1RP43220 463 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 ETV1P50549 477 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 RBM39Q14498 530 aaKnown RBP10.99□□□□□ -0.65
TCOF1-215ENST00000515516 IL13RA2Q14627 380 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 CDK5R1Q15078 307 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 LRRC36Q1X8D7 754 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 NSUN5P1Q3KNT7 163 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 C16orf82Q7Z2V1 217 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 CNIH3Q8TBE1 160 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 TMEM106AQ96A25 262 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 COQ2Q96H96 371 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 OR5M11Q96RB7 305 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 METTL9Q9H1A3 318 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 PCDHB16Q9NRJ7 776 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 SERTAD4Q9NUC0 356 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 BABAM2Q9NXR7 383 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms