RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PPP1R35Q8TAP8 253 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 SNX22Q96L94 193 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 NUDT16L1Q9BRJ7 211 aaKnown RBP17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4Q9UBX2 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 RAB27BO00194 218 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 DVL1O14640 695 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 GPR37O15354 613 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 PSPNO60542 156 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 CSN2P05814 226 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 SELLP14151 372 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 CHATP28329 748 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 BLVRBP30043 206 aaPredicted RBP17.44■□□□□ 0.38
LSM6-207ENST00000515311 OR3A1P47881 315 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 KCNJ3P48549 501 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 PAN3Q58A45 887 aaKnown RBP17.44■□□□□ 0.38
LSM6-207ENST00000515311 CMTM4Q8IZR5 234 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 SUMF2Q8NBJ7 301 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 TMEM185AQ8NFB2 350 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 OR5D13Q8NGL4 314 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 NEDD4LQ96PU5 975 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 DPCDQ9BVM2 203 aaPredicted RBP17.44■□□□□ 0.38
LSM6-207ENST00000515311 SHARPINQ9H0F6 387 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 MMP27Q9H306 513 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 SLC25A10Q9UBX3 287 aaPredicted RBP17.44■□□□□ 0.38
LSM6-207ENST00000515311 CLN8Q9UBY8 286 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 HSF4Q9ULV5 492 aa17.44■□□□□ 0.38
LSM6-207ENST00000515311 CR1P17927 2039 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 DOCK11Q5JSL3 2073 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 VPS13CQ709C8 3753 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 SOCS1O15524 211 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 HPGDSO60760 199 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 FCN3O75636 299 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 PAX5Q02548 391 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 RBM39Q14498 530 aaKnown RBP17.43■□□□□ 0.38
LSM6-207ENST00000515311 CNPY1Q3B7I2 92 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 C11orf91Q3C1V1 193 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 ESCO2Q56NI9 601 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 ATAD3CQ5T2N8 411 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 OR10R2Q8NGX6 335 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 S100A16Q96FQ6 103 aaKnown RBP17.43■□□□□ 0.38
LSM6-207ENST00000515311 SSBP3Q9BWW4 388 aaPredicted RBP17.43■□□□□ 0.38
LSM6-207ENST00000515311 PEX16Q9Y5Y5 336 aa17.43■□□□□ 0.38
LSM6-207ENST00000515311 A8MXK9 166 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 MGST3O14880 152 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 IL2RGP31785 369 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 SEC61A1P61619 476 aaKnown RBP17.42■□□□□ 0.38
LSM6-207ENST00000515311 GRK1Q15835 563 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 MOGAT2Q3SYC2 334 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 WDR25Q64LD2 544 aaPredicted RBP17.42■□□□□ 0.38
LSM6-207ENST00000515311 METAP1DQ6UB28 335 aaPredicted RBP17.42■□□□□ 0.38
LSM6-207ENST00000515311 OR4S1Q8NGB4 309 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 PHF21AQ96BD5 680 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 RAB3CQ96E17 227 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 C1orf159Q96HA4 380 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 C6orf62Q9GZU0 229 aaPredicted RBP17.42■□□□□ 0.38
LSM6-207ENST00000515311 CHST6Q9GZX3 395 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 PPA2Q9H2U2 334 aa17.42■□□□□ 0.38
LSM6-207ENST00000515311 ABCA2Q9BZC7 2435 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 FLNAP21333 2647 aaKnown RBP17.41■□□□□ 0.38
LSM6-207ENST00000515311 YLPM1P49750 1951 aaKnown RBP17.41■□□□□ 0.38
LSM6-207ENST00000515311 MCRIP1C9JLW8 97 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 RGS5O15539 181 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 EIF4EP06730 217 aaKnown RBP17.41■□□□□ 0.38
LSM6-207ENST00000515311 ELK1P19419 428 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 TMEM50BP56557 158 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 GNB2P62879 340 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 ARL6IP1Q15041 203 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 NKAPLQ5M9Q1 402 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 C6orf201Q7Z4U5 140 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 MIXL1Q9H2W2 232 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 DIABLOQ9NR28 239 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 PLEKHJ1Q9NW61 149 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 ADAM30Q9UKF2 790 aa17.41■□□□□ 0.38
LSM6-207ENST00000515311 HSPB6O14558 160 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 CTDSP2O14595 271 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 ECDO95905 644 aaPredicted RBP17.4■□□□□ 0.38
LSM6-207ENST00000515311 NDUFB7P17568 137 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 PLAC9Q5JTB6 97 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 SPNS3Q6ZMD2 512 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 Q6ZTK2 550 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 GDPD3Q7L5L3 318 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 LAX1Q8IWV1 398 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 ST8SIA4Q92187 359 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 ARHGAP5-AS1Q96IT6 56 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.4■□□□□ 0.38
LSM6-207ENST00000515311 MALRD1Q5VYJ5 2156 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 AKAP9Q99996 3911 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 DSCAML1Q8TD84 2053 aa17.4■□□□□ 0.38
LSM6-207ENST00000515311 CYSRT1A8MQ03 144 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 KIAA1324LA8MWY0 1029 aaPredicted RBP17.39■□□□□ 0.37
LSM6-207ENST00000515311 XRCC3O43542 346 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 CA11O75493 328 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 FOXH1O75593 365 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 HIST1H1DP16402 221 aaKnown RBP17.39■□□□□ 0.37
LSM6-207ENST00000515311 CDK2P24941 298 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 ERP29P30040 261 aaKnown RBP17.39■□□□□ 0.37
LSM6-207ENST00000515311 ATXN7L3Q14CW9 347 aaPredicted RBP17.39■□□□□ 0.37
LSM6-207ENST00000515311 CD276Q5ZPR3 534 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 BRICD5Q6PL45 260 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 FGFRL1Q8N441 504 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms