RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 S100A16Q96FQ6 103 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 SNX22Q96L94 193 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 DMRTB1Q96MA1 342 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 NICN1Q9BSH3 213 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 RABL2AQ9UBK7 228 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 OR14J1Q9UGF5 321 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 RABL2BQ9UNT1 228 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 PEX16Q9Y5Y5 336 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 NF1P21359 2839 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 NIPBLQ6KC79 2804 aaeCLIP9.96□□□□□ -0.81
PDLIM5-220ENST00000514830 TMEM82A0PJX8 343 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 ISPDA4D126 451 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 CTDSP2O14595 271 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 MGST3O14880 152 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 ADAM20O43506 726 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 XRCC3O43542 346 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 PSPNO60542 156 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 CLPXO76031 633 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 TK1P04183 234 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 USF1P22415 310 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 DUSP1P28562 367 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 ERP29P30040 261 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 BLVRBP30043 206 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 OR3A1P47881 315 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 VEGFCP49767 419 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 RBM39Q14498 530 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 LYPD2Q6UXB3 125 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 OR8H2Q8N162 312 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 SUMF2Q8NBJ7 301 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 OR8B3Q8NGG8 313 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 CLDND2Q8NHS1 167 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 OR8B2Q96RD0 313 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 CCL13Q99616 98 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 DPCDQ9BVM2 203 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 ATG5Q9H1Y0 275 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 DIABLOQ9NR28 239 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 CTSZQ9UBR2 303 aa9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 POLR3KQ9Y2Y1 108 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-220ENST00000514830 FLNAP21333 2647 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 IGHV4-61A0A0C4DH41 118 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 SERPINE3A8MV23 424 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 MCRIP1C9JLW8 97 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 MFNGO00587 321 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 SOCS1O15524 211 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 HPGDSO60760 199 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 FCN3O75636 299 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 EIF4EP06730 217 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 HEXAP06865 529 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 MELTFP08582 738 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 GSTP1P09211 210 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF44P15621 663 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 RPS2P15880 293 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 HIST1H1DP16402 221 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 ELK1P19419 428 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 GABRR1P24046 479 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 GABRA2P47869 451 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 CEBPDP49716 269 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 SNU13P55769 128 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 BAIAP2L2Q6UXY1 529 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 Q6ZTK2 550 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 FAM216BQ8N7L0 139 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNRF1Q8ND25 227 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 ST8SIA4Q92187 359 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 PHF21AQ96BD5 680 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 RAB3CQ96E17 227 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 C6orf62Q9GZU0 229 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 PCDHB10Q9UN67 800 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 MALRD1Q5VYJ5 2156 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.824e-6■□□□□ 9.7
PDLIM5-220ENST00000514830 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
PDLIM5-220ENST00000514830 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 FUOMA2VDF0 154 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 SIRPB1O00241 398 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 DVL1O14640 695 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 RGS5O15539 181 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 NDUFB3O43676 98 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 CDK2P24941 298 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.829e-7■■■■■ 28.1
PDLIM5-220ENST00000514830 ETV6P41212 452 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PNLIPRP3Q17RR3 467 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 MOGAT2Q3SYC2 334 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF260Q3ZCT1 412 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PAN3Q58A45 887 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PLAC9Q5JTB6 97 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 ATAD3CQ5T2N8 411 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 SLC35E4Q6ICL7 350 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 METAP1DQ6UB28 335 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 LAX1Q8IWV1 398 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 OR4S1Q8NGB4 309 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms