RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 PLPPR1Q8TBJ4 325 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 MED30Q96HR3 178 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 TMEM59Q9BXS4 323 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
HTT-213ENST00000513806 CST11Q9H112 138 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 DNTTIP1Q9H147 329 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 YAE1D1Q9NRH1 226 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 HIF1ANQ9NWT6 349 aa9.37□□□□□ -0.91
HTT-213ENST00000513806 SONP18583 2426 aaKnown RBP9.37□□□□□ -0.91
HTT-213ENST00000513806 UBE2QL1A1L167 161 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 A8MXK9 166 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 B4DSR2 109 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 CD5LO43866 347 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 ZNF780AO75290 641 aaPredicted RBP9.36□□□□□ -0.91
HTT-213ENST00000513806 FOXH1O75593 365 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 AVPP01185 164 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 IL1AP01583 271 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 UBBP0CG47 229 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 GLIPR1P48060 266 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 PSMD7P51665 324 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 EDDM3BP56851 147 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 MADCAM1Q13477 382 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 GPR176Q14439 515 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 FOXB2Q5VYV0 432 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 OLFML2AQ68BL7 652 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 CLEC9AQ6UXN8 241 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 USP43Q70EL4 1123 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 FAM185AQ8N0U4 392 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 KCNG3Q8TAE7 436 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 SLC25A46Q96AG3 418 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 TMEM186Q96B77 213 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 COQ2Q96H96 371 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 SNX22Q96L94 193 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 NUDT16L1Q9BRJ7 211 aaKnown RBP9.36□□□□□ -0.91
HTT-213ENST00000513806 DPCDQ9BVM2 203 aaPredicted RBP9.36□□□□□ -0.91
HTT-213ENST00000513806 RHOFQ9HBH0 211 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 GHRLQ9UBU3 117 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 GLS2Q9UI32 602 aa9.36□□□□□ -0.91
HTT-213ENST00000513806 IGHV2-70DA0A0C4DH43 119 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 CCL3L1P16619 93 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 LMO1P25800 156 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 CFPP27918 469 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 BMXP51813 675 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 TMBIM6P55061 237 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 ZNF273Q14593 569 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 RAB12Q6IQ22 244 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 FAHD2BQ6P2I3 314 aaPredicted RBP9.35□□□□□ -0.91
HTT-213ENST00000513806 TCF23Q7RTU1 214 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 OR2W3Q7Z3T1 314 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 C6orf201Q7Z4U5 140 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 OR8H2Q8N162 312 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 NEK7Q8TDX7 302 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 RAB2BQ8WUD1 216 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
HTT-213ENST00000513806 SLC25A38Q96DW6 304 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 FAHD2AQ96GK7 314 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 SULT4A1Q9BR01 284 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 TM2D1Q9BX74 207 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 ONECUT1Q9UBC0 465 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 RPUSD1Q9UJJ7 312 aaKnown RBP9.35□□□□□ -0.91
HTT-213ENST00000513806 ELF5Q9UKW6 265 aaPredicted RBP9.35□□□□□ -0.91
HTT-213ENST00000513806 PEX16Q9Y5Y5 336 aa9.35□□□□□ -0.91
HTT-213ENST00000513806 A0A075B6Q4 140 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 IGHV3OR16-10A0A075B7F0 116 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 A0A1W2PQ09 198 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 NOL3O60936 208 aaKnown RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 CHATP28329 748 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 BLVRBP30043 206 aaPredicted RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 NPY4RP50391 375 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 TMEM50BP56557 158 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 ARF6P62330 175 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 MPV17LQ2QL34 196 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 PLAC9Q5JTB6 97 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 KRBOX4Q5JUW0 171 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 DCAF12L2Q5VW00 463 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 C1orf229Q6ZS94 237 aaPredicted RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 GDPD3Q7L5L3 318 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 GLCCI1Q86VQ1 547 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 IZUMO1Q8IYV9 350 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 CCDC107Q8WV48 283 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 RAB40AQ8WXH6 277 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 ARHGAP5-AS1Q96IT6 56 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 HDHD3Q9BSH5 251 aaPredicted RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 DCUN1D5Q9BTE7 237 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 FAAP24Q9BTP7 215 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 TMPRSS13Q9BYE2 586 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 ATG5Q9H1Y0 275 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 ZMAT3Q9HA38 289 aaKnown RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 PCDHB16Q9NRJ7 776 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 RCC2Q9P258 522 aaKnown RBP9.34□□□□□ -0.91
HTT-213ENST00000513806 COMMD3Q9UBI1 195 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 KIF25Q9UIL4 384 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
HTT-213ENST00000513806 TRAV20A0A0B4J274 112 aa9.33□□□□□ -0.92
HTT-213ENST00000513806 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms