RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SOX2P48431 317 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 DEFA6Q01524 100 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 HERPUD1Q15011 391 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 LRRC36Q1X8D7 754 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 HEPN1Q6WQI6 88 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 ASCL4Q6XD76 172 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 CHST4Q8NCG5 386 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 OR4P4Q8NGL7 312 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 TSEN15Q8WW01 171 aaKnown RBP14.44□□□□□ -0.1
TPM3-220ENST00000509601 CLEC7AQ9BXN2 247 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 NPFFR1Q9GZQ6 430 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 ZNF702PQ9H963 129 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 BABAM2Q9NXR7 383 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 TAS2R3Q9NYW6 316 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 HILPDAQ9Y5L2 63 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 TRGV10A0A0A0MS01 117 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 FUOMA2VDF0 154 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 FAM90A22PA8MWA6 464 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 GABRPO00591 440 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TSPAN15O95858 294 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 CGB3P0DN86 165 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 CGB7P0DN87 165 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 RAB3AP20336 220 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 MTNR1BP49286 362 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 PRAMEF5Q5TYX0 476 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TTC23Q5W5X9 447 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 C11orf88Q6PI97 169 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TRAPPC6BQ86SZ2 158 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TMEM219Q86XT9 240 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 Q8N2B8 174 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 ABHD12Q8N2K0 398 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 OR51T1Q8NGJ9 327 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 OR2T6Q8NHC8 308 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 GPR148Q8TDV2 347 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 CFHR4Q92496 578 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 STMN2Q93045 179 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 SERTAD4Q9NUC0 356 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TAS2R4Q9NYW5 299 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.43□□□□□ -0.1
TPM3-220ENST00000509601 DIMT1Q9UNQ2 313 aaKnown RBP14.43□□□□□ -0.1
TPM3-220ENST00000509601 PCDHGB5Q9Y5G0 923 aa14.43□□□□□ -0.1
TPM3-220ENST00000509601 TRAV24A0A0B4J272 114 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 ODAMA1E959 279 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 IGLV1-47P01700 117 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 ALDOBP05062 364 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 CDK2P24941 298 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 C17orf58Q2M2W7 97 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 KRBOX4Q5JUW0 171 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 UTF1Q5T230 341 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 Q6ZS46 218 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 SATL1Q86VE3 508 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 ZNF485Q8NCK3 441 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 CYGBQ8WWM9 190 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 GGHQ92820 318 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 NR1H4Q96RI1 486 aaPredicted RBP14.42□□□□□ -0.1
TPM3-220ENST00000509601 NKX3-1Q99801 234 aaPredicted RBP14.42□□□□□ -0.1
TPM3-220ENST00000509601 ABCB10Q9NRK6 738 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 ING3Q9NXR8 418 aa14.42□□□□□ -0.1
TPM3-220ENST00000509601 HTR1DP28221 377 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 BLCAPP62952 87 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 BDH1Q02338 343 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 SLC34A1Q06495 639 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 HABP2Q14520 560 aaPredicted RBP14.41□□□□□ -0.1
TPM3-220ENST00000509601 OR52W1Q6IF63 320 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 LAIR2Q6ISS4 152 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 TMPRSS11AQ6ZMR5 421 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 Q6ZTK2 550 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 RTN4RL2Q86UN3 420 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 DHRSXQ8N5I4 330 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 KLHDC1Q8N7A1 406 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 PACRGLQ8N7B6 248 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 C11orf44Q8N8P7 122 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 FAM110DQ8TAY7 271 aaPredicted RBP14.41□□□□□ -0.1
TPM3-220ENST00000509601 NDNFQ8TB73 568 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 TNFAIP8L1Q8WVP5 186 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 ORAI1Q96D31 301 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 TMEM80Q96HE8 168 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 PPIL3Q9H2H8 161 aaKnown RBP14.41□□□□□ -0.1
TPM3-220ENST00000509601 GAL3ST2Q9H3Q3 398 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 DPM3Q9P2X0 92 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 ZNF281Q9Y2X9 895 aa14.41□□□□□ -0.1
TPM3-220ENST00000509601 EXOSC1Q9Y3B2 195 aaKnown RBP14.41□□□□□ -0.1
TPM3-220ENST00000509601 IRGMA1A4Y4 181 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 H0YJX3 145 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 MAGEB3O15480 346 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 CD34P28906 385 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 RPS11P62280 158 aaKnown RBP eCLIP14.4□□□□□ -0.1
TPM3-220ENST00000509601 ATXN7L3Q14CW9 347 aaPredicted RBP14.4□□□□□ -0.1
TPM3-220ENST00000509601 DMKNQ6E0U4 476 aaPredicted RBP14.4□□□□□ -0.1
TPM3-220ENST00000509601 DTX3Q8N9I9 347 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 OR13C5Q8NGS8 318 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 OR10K1Q8NGX5 313 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 WIPF2Q8TF74 440 aaPredicted RBP14.4□□□□□ -0.1
TPM3-220ENST00000509601 GHSRQ92847 366 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 TMEM106AQ96A25 262 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 GPER1Q99527 375 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 NCOR1P1Q9H4R4 102 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 ZNF286AQ9HBT8 521 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 C8orf4Q9NR00 106 aa14.4□□□□□ -0.1
TPM3-220ENST00000509601 PITPNC1Q9UKF7 332 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms