RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TMEM133Q9H2Q1 129 aa11.97□□□□□ -0.49
UBE2D3-228ENST00000508974 SEBOXQ9HB31 216 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-228ENST00000508974 CMYA5Q8N3K9 4069 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 TRGV10A0A0A0MS01 117 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 H0YJX3 145 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 SLC33A1O00400 549 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 TIMM23O14925 209 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 TSPAN15O95858 294 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 CDK2P24941 298 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 GDNFP39905 211 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 OR3A4PP47883 348 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 SLC34A1Q06495 639 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 HABP2Q14520 560 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 AANATQ16613 207 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 KRBOX4Q5JUW0 171 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 SETD9Q8NE22 299 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 TMEM106AQ96A25 262 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 MALSU1Q96EH3 234 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 COQ2Q96H96 371 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 TMEM80Q96HE8 168 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 GAL3ST2Q9H3Q3 398 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 FOXJ3Q9UPW0 622 aa11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 UBE2J1Q9Y385 318 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-228ENST00000508974 IRGMA1A4Y4 181 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 ODAMA1E959 279 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 MEGF11A6BM72 1044 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 F2RL2O00254 374 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 KCNAB3O43448 404 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 WIPF1O43516 503 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 CDRT1O95170 752 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 HTR3BO95264 441 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 CD2P06729 351 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 GNAO1P09471 354 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 LMO1P25800 156 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 ERP29P30040 261 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 ADARB1P78563 741 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 RSU1Q15404 277 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 PIGYQ3MUY2 71 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 CCDC58Q4VC31 144 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 CCBE1Q6UXH8 406 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 OR2T6Q8NHC8 308 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 RPS4Y2Q8TD47 263 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 HAVCR2Q8TDQ0 301 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 NPFFR1Q9GZQ6 430 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 RAB18Q9NP72 206 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 BABAM2Q9NXR7 383 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 FBLN5Q9UBX5 448 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 TCF19Q9Y242 345 aa11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 EXOSC1Q9Y3B2 195 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-228ENST00000508974 FUOMA2VDF0 154 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 VGLL3A8MV65 326 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 XPNPEP2O43895 674 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ALX3O95076 343 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 VSIG10L2P0DP72 767 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 PTGFRP43088 359 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 GLP1RP43220 463 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 MTNR1BP49286 362 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 PPP3R1P63098 170 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 DDI2Q5TDH0 399 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF529Q6P280 563 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 C8orf59Q8N0T1 100 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ABHD12Q8N2K0 398 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 KLHDC1Q8N7A1 406 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 CHST4Q8NCG5 386 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 FAM110DQ8TAY7 271 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 GGHQ92820 318 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 SMIM19Q96E16 107 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 RHOFQ9HBH0 211 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ING4Q9UNL4 249 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 ZNF281Q9Y2X9 895 aa11.94□□□□□ -0.5
UBE2D3-228ENST00000508974 A0A1W2PPK0 400 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 A6NDX4 124 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 OGG1O15527 345 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 CD24P25063 80 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 NFYBP25208 207 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 HTR1DP28221 377 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 CAPGP40121 348 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 KIR2DS4P43632 304 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 EFNB2P52799 333 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 ST3GAL4Q11206 333 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 MED21Q13503 144 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 LTC4SQ16873 150 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 ARSJQ5FYB0 599 aaPredicted RBP11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 UTF1Q5T230 341 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 HEPN1Q6WQI6 88 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 AHSA2Q719I0 299 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 PXT1Q8NFP0 134 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 OR4P4Q8NGL7 312 aa11.93□□□□□ -0.5
UBE2D3-228ENST00000508974 GHSRQ92847 366 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms