RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 WDR76Q9H967 626 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 ST6GALNAC2Q9UJ37 374 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 PITPNC1Q9UKF7 332 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 MGAT4AQ9UM21 535 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 ATMQ13315 3056 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 KALRNO60229 2985 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 IGLV1-36A0A0B4J1U3 117 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 RFPL4AA6NLU0 287 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 RFPL4AL1F8VTS6 287 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TNFSF11O14788 317 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SLC19A2O60779 497 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 GAPDHP04406 335 aaKnown RBP6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CD5P06127 495 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TACSTD2P09758 323 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 PGA4P0DJD7 388 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 PGA3P0DJD8 388 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 PLA2G2AP14555 144 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 MYL9P24844 172 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CCR6P51684 374 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CRYBA4P53673 196 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 DEFA6Q01524 100 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 PAX5Q02548 391 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TAB1Q15750 504 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CARTPTQ16568 116 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TP53I3Q53FA7 332 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 ACSM3Q53FZ2 586 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 IDNKQ5T6J7 187 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 FAM27D1Q5T7N8 215 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SLC25A47Q6Q0C1 308 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 LINGO2Q7L985 606 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 Q8N402 240 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 OR6K6Q8NGW6 343 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 OR10D3Q8NH80 312 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SMIM19Q96E16 107 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 Q96MF0 132 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 NPAP1Q9NZP6 1156 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 MAGEB4O15481 346 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-206ENST00000507875 HLA-DQB1P01920 261 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SLC2A2P11168 524 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-206ENST00000507875 BIDP55957 195 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CD81P60033 236 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 IFITM2Q01629 132 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 PMPCAQ10713 525 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CDK5R1Q15078 307 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 AGAP6Q5VW22 663 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF544Q6NX49 715 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SFXN4Q6P4A7 337 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 RPL22L1Q6P5R6 122 aaKnown RBP6.08□□□□□ -1.44
CLCN3-206ENST00000507875 FCRLAQ7L513 359 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 CDC20BQ86Y33 519 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 RNF128Q8TEB7 428 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TTYH2Q9BSA4 534 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 HES7Q9BYE0 225 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 TTTY10Q9BZA0 68 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SERTAD4Q9NUC0 356 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 SDHAF2Q9NX18 166 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 COPS3Q9UNS2 423 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 ARHGAP21Q5T5U3 1957 aa6.08□□□□□ -1.44
CLCN3-206ENST00000507875 FAM166BA8MTA8 275 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 PLA2G10O15496 165 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 CXCL13O43927 109 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 TIMM8AO60220 97 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SPP1P10451 314 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ELK1P19419 428 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR3A1P47881 315 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 CLDN15P56746 228 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 TRIQKQ629K1 86 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FAHD2BQ6P2I3 314 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 KCTD18Q6PI47 426 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 PAMR1Q6UXH9 720 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF562Q6V9R5 426 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 Q6ZSN1 163 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 LRRC28Q86X40 367 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SIAH3Q8IW03 269 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 C20orf196Q8IYI0 205 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR2AK2Q8NG84 335 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 WIPF2Q8TF74 440 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 CPNE2Q96FN4 548 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FAHD2AQ96GK7 314 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 PLEKHA1Q9HB21 404 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ACOXLQ9NUZ1 547 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF701Q9NV72 531 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 GNG8Q9UK08 70 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 TRAV1-2A0A0B4J238 106 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 A0A0G2JK05 382 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FAM25AB3EWG3 89 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FAM25CB3EWG5 89 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FAM25GB3EWG6 89 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 EIF3GO75821 320 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF432O94892 652 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 IFNA5P01569 189 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 NBEAP1P0C6P0 100 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 LINC00614P0C842 121 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 GABRA1P14867 456 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF823P16415 610 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 S100PP25815 95 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 CALCRP30988 508 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 GUCA1AP43080 201 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms