RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 BAIAP2L2Q6UXY1 529 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 Q6ZSV7 163 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 DYNAPQ8N1N2 210 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 NDNFQ8TB73 568 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 NRG4Q8WWG1 115 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 S100A13Q99584 98 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 CNOT2Q9NZN8 540 aaKnown RBP11.57□□□□□ -0.56
HOXC9-202ENST00000504557 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 MAGEA13PA6NCF6 341 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 SLC33A1O00400 549 aaPredicted RBP11.56□□□□□ -0.56
HOXC9-202ENST00000504557 ALX3O95076 343 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 JUNBP17275 347 aaPredicted RBP11.56□□□□□ -0.56
HOXC9-202ENST00000504557 CELP19835 753 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 BDKRB2P30411 391 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 GLP1RP43220 463 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 MTNR1BP49286 362 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 RIPK1Q13546 671 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 LINC01006Q8NI28 216 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 RPS4Y2Q8TD47 263 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 TFAP2CQ92754 450 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF184Q99676 751 aaPredicted RBP11.56□□□□□ -0.56
HOXC9-202ENST00000504557 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
HOXC9-202ENST00000504557 CKLFQ9UBR5 152 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 SESN1Q9Y6P5 492 aa11.56□□□□□ -0.56
HOXC9-202ENST00000504557 NBEAL1Q6ZS30 2694 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 TRAV8-7A0A075B6U6 113 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 IGHV2-26A0A0B4J1V2 119 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 A0A1B0GUS0 222 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 ODAMA1E959 279 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 CSTBP04080 98 aaKnown RBP11.55□□□□□ -0.56
HOXC9-202ENST00000504557 MAS1P04201 325 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 CDK2P24941 298 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 PTGFRP43088 359 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 WNT4P56705 351 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
HOXC9-202ENST00000504557 GABPB1Q06547 395 aaPredicted RBP11.55□□□□□ -0.56
HOXC9-202ENST00000504557 DOC2BQ14184 412 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 LTC4SQ16873 150 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 Q499Y3 187 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 YIF1BQ5BJH7 314 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF529Q6P280 563 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 JAGN1Q8N5M9 183 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 CHST4Q8NCG5 386 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 PXT1Q8NFP0 134 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 COQ2Q96H96 371 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 PGLYRP3Q96LB9 341 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 METTL9Q9H1A3 318 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 TMEM133Q9H2Q1 129 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 GAL3ST2Q9H3Q3 398 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
HOXC9-202ENST00000504557 RHOFQ9HBH0 211 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 ERGIC3Q9Y282 383 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 SIGLEC9Q9Y336 463 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 UBE2J1Q9Y385 318 aaPredicted RBP11.55□□□□□ -0.56
HOXC9-202ENST00000504557 MMP24Q9Y5R2 645 aa11.55□□□□□ -0.56
HOXC9-202ENST00000504557 MEIKINA0A087WXM9 373 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TRAV39A0A0B4J263 110 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TRBV5-5A0A0J9YX44 114 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 H0YHG0 523 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 RBP4P02753 201 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 NFYBP25208 207 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 LMO1P25800 156 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 ERP29P30040 261 aaKnown RBP11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TGFBR2P37173 567 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 GDNFP39905 211 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TAS2R43P59537 309 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 RPS11P62280 158 aaKnown RBP eCLIP11.54□□□□□ -0.56
HOXC9-202ENST00000504557 RBM39Q14498 530 aaKnown RBP11.54□□□□□ -0.56
HOXC9-202ENST00000504557 SLC22A6Q4U2R8 563 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 LDLRAD2Q5SZI1 272 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF626Q68DY1 528 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 NANOGP1Q8N7R0 232 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF485Q8NCK3 441 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 SGCDQ92629 289 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 MUL1Q969V5 352 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 CLEC7AQ9BXN2 247 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 KIF25Q9UIL4 384 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 ST3GAL6Q9Y274 331 aa11.54□□□□□ -0.56
HOXC9-202ENST00000504557 TET2Q6N021 2002 aaPredicted RBP11.53□□□□□ -0.56
HOXC9-202ENST00000504557 TRAV24A0A0B4J272 114 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 A0A1W2PP11 408 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 ODF3BA8MYP8 253 aa11.53□□□□□ -0.56
HOXC9-202ENST00000504557 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
HOXC9-202ENST00000504557 IGHV3-7P01780 117 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms