RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ARSJQ5FYB0 599 aaPredicted RBP9.64□□□□□ -0.87
MED28-203ENST00000503945 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 LPCAT4Q643R3 524 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 HIST2H2BDQ6DRA6 164 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 RPL22L1Q6P5R6 122 aaKnown RBP9.64□□□□□ -0.87
MED28-203ENST00000503945 HEPN1Q6WQI6 88 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 TMPRSS11AQ6ZMR5 421 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 TMEM219Q86XT9 240 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 KLHDC1Q8N7A1 406 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 C11orf44Q8N8P7 122 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 OR4D6Q8NGJ1 314 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 ZNF596Q8TC21 504 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 CREB3L1Q96BA8 519 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
MED28-203ENST00000503945 GPER1Q99527 375 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 ZNF649Q9BS31 505 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 ING3Q9NXR8 418 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 TET2Q6N021 2002 aaPredicted RBP9.64□□□□□ -0.87
MED28-203ENST00000503945 IRGMA1A4Y4 181 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 PLXNB1O43157 2135 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 MMP23AO75900 390 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 CD2P06729 351 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 CDK2P24941 298 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 C21orf33P30042 268 aaPredicted RBP9.63□□□□□ -0.87
MED28-203ENST00000503945 MTNR1BP49286 362 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 GTF2A1P52655 376 aaPredicted RBP9.63□□□□□ -0.87
MED28-203ENST00000503945 BLCAPP62952 87 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 BDH1Q02338 343 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 ZNF691Q5VV52 312 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 ELP2Q6IA86 826 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 Q6P435 159 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 TCF23Q7RTU1 214 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 RNF144BQ7Z419 303 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 GPR148Q8TDV2 347 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 CAPSLQ8WWF8 208 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 CFHR4Q92496 578 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 RDH12Q96NR8 316 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 FGF20Q9NP95 211 aaPredicted RBP9.63□□□□□ -0.87
MED28-203ENST00000503945 CHCHD3Q9NX63 227 aaKnown RBP9.63□□□□□ -0.87
MED28-203ENST00000503945 BABAM2Q9NXR7 383 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 SMPD3Q9NY59 655 aaPredicted RBP9.63□□□□□ -0.87
MED28-203ENST00000503945 OR6C3Q9NZP0 311 aa9.63□□□□□ -0.87
MED28-203ENST00000503945 ODAMA1E959 279 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 FAM90A22PA8MWA6 464 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 SLC33A1O00400 549 aaPredicted RBP9.62□□□□□ -0.87
MED28-203ENST00000503945 ALDOBP05062 364 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 CSN2P05814 226 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 LIMS3P0CW19 117 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 LIMS4P0CW20 117 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 CEACAM3P40198 252 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 SOX2P48431 317 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 RSU1Q15404 277 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 Q8N2B8 174 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 PXT1Q8NFP0 134 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 AKR1E2Q96JD6 320 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 S100A13Q99584 98 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 PCDHB16Q9NRJ7 776 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 ING4Q9UNL4 249 aa9.62□□□□□ -0.87
MED28-203ENST00000503945 MEGF11A6BM72 1044 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 ZNF729A6NN14 1252 aaPredicted RBP9.61□□□□□ -0.87
MED28-203ENST00000503945 H0YJX3 145 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 MYL12AP19105 171 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 PTGFRP43088 359 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 ETV1P50549 477 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 ZP1P60852 638 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 MED21Q13503 144 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 HABP2Q14520 560 aaPredicted RBP9.61□□□□□ -0.87
MED28-203ENST00000503945 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 SMN1Q16637 294 aaKnown RBP9.61□□□□□ -0.87
MED28-203ENST00000503945 PRAMEF5Q5TYX0 476 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 TTC23Q5W5X9 447 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 OR4P4Q8NGL7 312 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 CNIH3Q8TBE1 160 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 TNFAIP8L1Q8WVP5 186 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 APH1BQ8WW43 257 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 JAM3Q9BX67 310 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 NCOR1P1Q9H4R4 102 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 SERTAD4Q9NUC0 356 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 ZNF281Q9Y2X9 895 aa9.61□□□□□ -0.87
MED28-203ENST00000503945 MEIKINA0A087WXM9 373 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 KBTBD11-OT1A0A1B0GTJ5 212 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 G3V4G9 280 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 BUB1B-PAK6H3BSN5 160 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 OGG1O15527 345 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 FBXO24O75426 580 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 WBP4O75554 376 aaKnown RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 HTR3BO95264 441 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 OPN1MWP04001 364 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 OPN1MW2P0DN77 364 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 OPN1MW3P0DN78 364 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 JUNBP17275 347 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms