RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SULF2Q8IWU5 870 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 LRRC25Q8N386 305 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 GBGT1Q8N5D6 347 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SIRT6Q8N6T7 355 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 NUDT10Q8NFP7 164 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR5A2Q8NGI9 324 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TSEN15Q8WW01 171 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNRF4Q8WWF5 429 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZCCHC14Q8WYQ9 949 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPSB1Q96BD6 273 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SNX22Q96L94 193 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SLC46A1Q96NT5 459 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ALKBH7Q9BT30 221 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CDH20Q9HBT6 801 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 LPAR2Q9HBW0 351 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPHK2Q9NRA0 654 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 DHDHQ9UQ10 334 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 LAMP3Q9UQV4 416 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RBM7Q9Y580 266 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR51B2Q9Y5P1 312 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPTBP11277 2137 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 G3V3Y1 287 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TRAPPC2LH3BP13 241 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SIRPB1O00241 398 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 AGRPO00253 132 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HMGN4O00479 90 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HPNP05981 417 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR10J4P0C629 311 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CEACAM1P13688 526 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 IRF2P14316 349 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 AK4P27144 223 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 MDH2P40926 338 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CDKN2AP42771 156 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PIGPP57054 158 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 B3GALT5-AS1P59052 145 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF117Q03924 483 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 EXT1Q16394 746 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HLA-BQ31612 363 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF585BQ52M93 769 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SDHAF4Q5VUM1 108 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR8G2PQ6IF36 304 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 FAM151BQ6UXP7 276 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TTLL10Q6ZVT0 673 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 MOB1BQ7L9L4 216 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SYT9Q86SS6 491 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HOGA1Q86XE5 327 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 DMRTC2Q8IXT2 367 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CELF5Q8N6W0 485 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 Q8NA96 180 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR6K6Q8NGW6 343 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR4K13Q8NH42 304 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR2V1Q8NHB1 315 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 THAP3Q8WTV1 239 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PLA2G12AQ9BZM1 189 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 LINC00470Q9BZP3 86 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZDHHC11Q9H8X9 412 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PRDM6Q9NQX0 595 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF701Q9NV72 531 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPANXCQ9NY87 97 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PLEK2Q9NYT0 353 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CNIH4Q9P003 139 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 GSKIPQ9P0R6 139 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ACACBO00763 2458 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SETXQ7Z333 2677 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ATRQ13535 2644 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 XKRY2A2RUG3 117 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CDC14CA4D256 554 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 A6NIN4 97 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 C4orf51C9J302 202 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 FAM157AC9JC47 383 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 XKRYO14609 159 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TCF21O43680 179 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF253O75346 499 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 MT-CO2P00403 227 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HRASP01112 189 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SLC35G6P0C7Q6 338 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 BCL2P10415 239 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TCN2P20062 427 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RAB7AP51149 207 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SUMO1P63165 101 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ELOBQ15370 118 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RSPO1Q2MKA7 263 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ABHD17CQ6PCB6 329 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 NIT1Q86X76 327 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 C1orf174Q8IYL3 243 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PRSS58Q8IYP2 241 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 POC1AQ8NBT0 407 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 NDRG1Q92597 394 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HIST1H2AAQ96QV6 131 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SMIM7Q9BQ49 75 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 FAAP24Q9BTP7 215 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR51I2Q9H344 312 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM231Q9H6L2 316 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 EGLN3Q9H6Z9 239 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR6C3Q9NZP0 311 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HSF4Q9ULV5 492 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 FREM2Q5SZK8 3169 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 A0A1W2PPE3 182 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 METTL12A8MUP2 240 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HSD17B6O14756 317 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms