RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MUC22E2RYF6 1773 aaPredicted RBP3.4□□□□□ -1.86
HMGB1P21-201ENST00000502313 HELZP42694 1942 aaKnown RBP3.4□□□□□ -1.86
HMGB1P21-201ENST00000502313 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 A0A0G2JND7 137 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 GNG14A0A1W2PPG7 69 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 GYG2O15488 501 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CRXO43186 299 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 FGF17O60258 216 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 EDF1O60869 148 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CNIH1O95406 144 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 AIFM1O95831 613 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CRYAAP02489 173 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 RLN2P04090 185 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 IFNA16P05015 189 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 APODP05090 189 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 ISG15P05161 165 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 HLA-DQB2P05538 268 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 EIF4EP06730 217 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 HCKP08631 526 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR5AL1P0C617 328 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CD37P11049 281 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 HOXB6P17509 224 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 ME2P23368 584 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CEACAM6P40199 344 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 IDH3GP51553 393 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 DLX6P56179 175 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR4D2P58180 307 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM3AP98173 230 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 RUNX3Q13761 415 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 C4orf26Q17RF5 130 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF658BQ4V348 819 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 AKIRIN2Q53H80 203 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 N4BP2L1Q5TBK1 243 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM215Q68D42 235 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR2T5Q6IEZ7 315 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 Q6ZS52 159 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM92BQ6ZTR7 304 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 NFE4Q86UQ8 179 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 P2RY8Q86VZ1 359 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 THOC6Q86W42 341 aaKnown RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 C9orf40Q8IXQ3 194 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC34A3Q8N130 599 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 C6orf223Q8N319 242 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 RFLNBQ8N5W9 214 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 NPWQ8N729 165 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR1M1Q8NGA1 313 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR4F15Q8NGB8 312 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR2A12Q8NGT7 310 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR2T29Q8NH02 315 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 ANKRD9Q96BM1 317 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZMYND19Q96E35 227 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 PIK3IP1Q96FE7 263 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 RBP7Q96R05 134 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 P2RX4Q99571 388 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 HOPXQ9BPY8 73 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR51B5Q9H339 312 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 MOB1AQ9H8S9 216 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 UGT1A8Q9HAW9 530 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 INIPQ9NRY2 104 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 PLCXD1Q9NUJ7 323 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 IL17CQ9P0M4 197 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 NEU3Q9UQ49 428 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 SNX10Q9Y5X0 201 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 V9GY05 133 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 TICRRQ7Z2Z1 1910 aa3.4□□□□□ -1.87
HMGB1P21-201ENST00000502313 KALRNO60229 2985 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 MYO16Q9Y6X6 1858 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 BPTFQ12830 3046 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 GON4LQ3T8J9 2241 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 NBEAQ8NFP9 2946 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGHV2OR16-5A0A0B4J2B6 119 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 FUOMA2VDF0 154 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 AZIN1O14977 448 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 SSNA1O43805 119 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PLIN3O60664 434 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 SUPT7LO94864 414 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC25A14O95258 325 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 BCHEP06276 602 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 C8GP07360 202 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 VDAC1P21796 283 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PRKACGP22612 351 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPS3P23396 243 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 F8A1P23610 371 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PSMA1P25786 263 aaKnown RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 NUDT1P36639 197 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PMELP40967 661 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR12D2P58182 307 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 MAXP61244 160 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 CRADDP78560 199 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 IL5RAQ01344 420 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 SKP2Q13309 424 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms