RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF529Q6P280 563 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 TMEM219Q86XT9 240 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 PACRGLQ8N7B6 248 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 NDNFQ8TB73 568 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 RPS4Y2Q8TD47 263 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 COQ2Q96H96 371 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 FAM192AQ9GZU8 254 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
NR1H3-227ENST00000498548 FBLN5Q9UBX5 448 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 DIMT1Q9UNQ2 313 aaKnown RBP13.01□□□□□ -0.33
NR1H3-227ENST00000498548 FOXJ3Q9UPW0 622 aa13.01□□□□□ -0.33
NR1H3-227ENST00000498548 UBE2J1Q9Y385 318 aaPredicted RBP13.01□□□□□ -0.33
NR1H3-227ENST00000498548 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 IRGMA1A4Y4 181 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 H0YJX3 145 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 XPNPEP2O43895 674 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 HTR3BO95264 441 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 GNAO1P09471 354 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 MYL12AP19105 171 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 CDK2P24941 298 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 OR3A4PP47883 348 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 MTNR1BP49286 362 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 CCDC58Q4VC31 144 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 UTF1Q5T230 341 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 LAIR2Q6ISS4 152 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 SETD9Q8NE22 299 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 HAVCR2Q8TDQ0 301 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 TMEM106AQ96A25 262 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 CLEC7AQ9BXN2 247 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 RHOFQ9HBH0 211 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 ABCB10Q9NRK6 738 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 CHCHD3Q9NX63 227 aaKnown RBP13□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF281Q9Y2X9 895 aa13□□□□□ -0.33
NR1H3-227ENST00000498548 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 ODAMA1E959 279 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 A6NDX4 124 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 TIMM23O14925 209 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 KCNAB3O43448 404 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 WIPF1O43516 503 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 CDRT1O95170 752 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 CAPGP40121 348 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 KIR2DS4P43632 304 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 SLC34A1Q06495 639 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 HABP2Q14520 560 aaPredicted RBP12.99□□□□□ -0.33
NR1H3-227ENST00000498548 RSU1Q15404 277 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
NR1H3-227ENST00000498548 ABHD12Q8N2K0 398 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 OR4C13Q8NGP0 309 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 CORO2AQ92828 525 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 GHSRQ92847 366 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 FOXRED1Q96CU9 486 aaPredicted RBP12.99□□□□□ -0.33
NR1H3-227ENST00000498548 C8orf4Q9NR00 106 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 TCF19Q9Y242 345 aa12.99□□□□□ -0.33
NR1H3-227ENST00000498548 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 A0A1W2PPK0 400 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 FUOMA2VDF0 154 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 VGLL3A8MV65 326 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 M0QZ24 198 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 TSPAN15O95858 294 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 CD2P06729 351 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 EFNB2P52799 333 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 DOC2BQ14184 412 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 C17orf58Q2M2W7 97 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 DDI2Q5TDH0 399 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 DMKNQ6E0U4 476 aaPredicted RBP12.98□□□□□ -0.33
NR1H3-227ENST00000498548 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 C8orf59Q8N0T1 100 aaPredicted RBP12.98□□□□□ -0.33
NR1H3-227ENST00000498548 CHST4Q8NCG5 386 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 GAL3ST2Q9H3Q3 398 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 TAS2R3Q9NYW6 316 aa12.98□□□□□ -0.33
NR1H3-227ENST00000498548 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
NR1H3-227ENST00000498548 ALDOBP05062 364 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 VSIG10L2P0DP72 767 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 CD24P25063 80 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 HTR1DP28221 377 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 BDKRB2P30411 391 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 PTGFRP43088 359 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 MED21Q13503 144 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 PAN3Q58A45 887 aaKnown RBP12.97□□□□□ -0.33
NR1H3-227ENST00000498548 MINOS1Q5TGZ0 78 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 HEPN1Q6WQI6 88 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 Q6ZS46 218 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF485Q8NCK3 441 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 OR4P4Q8NGL7 312 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 OR2T6Q8NHC8 308 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 FAM110DQ8TAY7 271 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms