RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 NTF3P20783 257 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 IL3RAP26951 378 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 GNRHRP30968 328 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 ARR3P36575 388 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 NUP62P37198 522 aaPredicted RBP2.32□□□□□ -2.04
PTPRK-215ENST00000498284 GALR1P47211 349 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 PSMB2P49721 201 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
PTPRK-215ENST00000498284 BTN1A1Q13410 526 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 NDUFAF6Q330K2 333 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 PRR9Q5T870 116 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 HHATQ5VTY9 493 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 ASCL4Q6XD76 172 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 ORMDL3Q8N138 153 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 SLC25A29Q8N8R3 303 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 OR13C9Q8NGT0 318 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 HGDQ93099 445 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 MRPL48Q96GC5 212 aaKnown RBP2.32□□□□□ -2.04
PTPRK-215ENST00000498284 TBL1XR1Q9BZK7 514 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 TM6SF2Q9BZW4 377 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 CHRNA10Q9GZZ6 450 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 RAB22AQ9UL26 194 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 RAB23Q9ULC3 237 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 CFL2Q9Y281 166 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 V9GYY9 64 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 TPRP12270 2363 aaKnown RBP2.32□□□□□ -2.04
PTPRK-215ENST00000498284 RTL9Q8NET4 1388 aa2.32□□□□□ -2.04
PTPRK-215ENST00000498284 TRANK1O15050 2925 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 COL4A1P02462 1669 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 LTBP2Q14767 1821 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 ANKRD11Q6UB99 2663 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 DOCK3Q8IZD9 2030 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 IGHV6-1A0A0B4J1U7 121 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 A0A0X1KG70 313 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 SEC14L6B5MCN3 397 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 PRAMEF26H0Y7S4 382 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 GMDSO60547 372 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 HTR2CP28335 458 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 DEKP35659 375 aaKnown RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 MLF1P58340 268 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 GRB2P62993 217 aaKnown RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 ELF3P78545 371 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 LAMTOR4Q0VGL1 99 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 MAPRE2Q15555 327 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 TMEM31Q5JXX7 168 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 SLC25A25Q6KCM7 469 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 EPGNQ6UW88 154 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 CASP12Q6UXS9 341 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 PDPNQ86YL7 162 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 BBS7Q8IWZ6 715 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 ZCCHC24Q8N2G6 241 aaKnown RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 UTP23Q9BRU9 249 aaKnown RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 FRMD8P1Q9BZ68 369 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-215ENST00000498284 PLEKHF2Q9H8W4 249 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 ANKHQ9HCJ1 492 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 AGPAT3Q9NRZ7 376 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 CHD7Q9P2D1 2997 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 ORC6Q9Y5N6 252 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 CHD9Q3L8U1 2897 aa2.31□□□□□ -2.04
PTPRK-215ENST00000498284 SCN1AP35498 2009 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 PTPRZ1P23471 2315 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-215ENST00000498284 DCHS1Q96JQ0 3298 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 TRAV8-7A0A075B6U6 113 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 FAM240AA0A1B0GVK7 77 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 MFNGO00587 321 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 NDUFS5O43920 106 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 OR7C2O60412 319 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 CNMDO75829 334 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 LHBP01229 141 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 PAX6P26367 422 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 MPV17P39210 176 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 GDI2P50395 445 aaKnown RBP2.3□□□□□ -2.04
PTPRK-215ENST00000498284 FBXO48Q5FWF7 155 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 FAM58AQ8N1B3 248 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 ZFAND1Q8TCF1 268 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 SMARCD1Q96GM5 515 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 C20orf144Q9BQM9 153 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 C1orf50Q9BV19 199 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 BEX2Q9BXY8 128 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 RWDD2AQ9UIY3 292 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 V9GYY5 206 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-215ENST00000498284 ARAP2Q8WZ64 1704 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 BRWD1Q9NSI6 2320 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 FAM186AA6NE01 2351 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 CACNA1HO95180 2353 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 RIF1Q5UIP0 2472 aaKnown RBP2.3□□□□□ -2.04
PTPRK-215ENST00000498284 CHD6Q8TD26 2715 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 KMT2BQ9UMN6 2715 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-215ENST00000498284 TRIOO75962 3097 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 CFAP47Q6ZTR5 3102 aa2.3□□□□□ -2.04
PTPRK-215ENST00000498284 WDR87Q6ZQQ6 2873 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 ACACBO00763 2458 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 LRRC37A2A6NM11 1700 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 MYO3BQ8WXR4 1341 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 ANKRD20A5PA0PJZ0 165 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 TVP23AA6NH52 213 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 RFXANKO14593 260 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms