RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LPAR2Q9HBW0 351 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 NDUFA13Q9P0J0 144 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 FBLN5Q9UBX5 448 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 ABCA1O95477 2261 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 K7N7A8 449 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 GPR37O15354 613 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 TK1P04183 234 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 IGHV4-31P0DP07 118 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 SNRPBP14678 240 aaKnown RBP16.62■□□□□ 0.25
CTSD-206ENST00000497544 RPS27AP62979 156 aaKnown RBP16.62■□□□□ 0.25
CTSD-206ENST00000497544 LCN2P80188 198 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 SPCS2Q15005 226 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 FAM189A2Q15884 450 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 ATAD3CQ5T2N8 411 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 CD276Q5ZPR3 534 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 ABRACLQ9P1F3 81 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 OR5V1Q9UGF6 321 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 RSL24D1Q9UHA3 163 aaKnown RBP16.62■□□□□ 0.25
CTSD-206ENST00000497544 WNK2Q9Y3S1 2297 aa16.62■□□□□ 0.25
CTSD-206ENST00000497544 TMEM82A0PJX8 343 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A10PA6NDY2 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A18PA6NE21 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A16PA6NEW6 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A20PA6NIJ5 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A8PA6NJQ4 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A7PA6NKC0 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A22PA8MWA6 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A12PA8MX19 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A5PA8MXJ8 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A23PA8MXZ1 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 H3BMQ9 156 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 LDLRAD4O15165 306 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 ZNF737O75373 536 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 PAHP00439 452 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A15PP0C7V4 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A13PP0C7W8 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A14PP0C7W9 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 FAM90A24PP0C7X0 464 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 ZFP36P26651 326 aaKnown RBP16.61■□□□□ 0.25
CTSD-206ENST00000497544 PAN3Q58A45 887 aaKnown RBP16.61■□□□□ 0.25
CTSD-206ENST00000497544 METAP1DQ6UB28 335 aaPredicted RBP16.61■□□□□ 0.25
CTSD-206ENST00000497544 H1FXQ92522 213 aaKnown RBP16.61■□□□□ 0.25
CTSD-206ENST00000497544 MSI2Q96DH6 328 aaKnown RBP16.61■□□□□ 0.25
CTSD-206ENST00000497544 TM2D1Q9BX74 207 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 SPACA1Q9HBV2 294 aa16.61■□□□□ 0.25
CTSD-206ENST00000497544 LOC105371242A0A075B767 164 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 SMIM31A0A1B0GVY4 71 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 DPPA5A6NC42 116 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 METTL21EPA6NDL7 271 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 A8MXK9 166 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 SLC33A1O00400 549 aaPredicted RBP16.6■□□□□ 0.25
CTSD-206ENST00000497544 PSPNO60542 156 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 ECDO95905 644 aaPredicted RBP16.6■□□□□ 0.25
CTSD-206ENST00000497544 TGFAP01135 160 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 MSMBP08118 114 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 RAB6AP20340 208 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 SOX6P35712 828 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 SCAND1P57086 179 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 GRK1Q15835 563 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 C11orf91Q3C1V1 193 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 C17orf107Q6ZR85 190 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 BTN2A1Q7KYR7 527 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 GDPD3Q7L5L3 318 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 OR8H2Q8N162 312 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 FGFRL1Q8N441 504 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 OR4S1Q8NGB4 309 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 PTX4Q96A99 478 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 NEDD4LQ96PU5 975 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 BARHL1Q9BZE3 327 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 CHST6Q9GZX3 395 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 RBM38Q9H0Z9 239 aaKnown RBP16.6■□□□□ 0.25
CTSD-206ENST00000497544 LPAR5Q9H1C0 372 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 PPA2Q9H2U2 334 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 IFT22Q9H7X7 185 aa16.6■□□□□ 0.25
CTSD-206ENST00000497544 TRAV24A0A0B4J272 114 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 HSPB6O14558 160 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 MGST3O14880 152 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 FCN3O75636 299 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 ZNF182P17025 639 aaPredicted RBP16.59■□□□□ 0.25
CTSD-206ENST00000497544 FUT3P21217 361 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 SUMF2Q8NBJ7 301 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 LGALS14Q8TCE9 139 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 KCTD12Q96CX2 325 aaKnown RBP16.59■□□□□ 0.25
CTSD-206ENST00000497544 SHARPINQ9H0F6 387 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 POLR3KQ9Y2Y1 108 aaPredicted RBP16.59■□□□□ 0.25
CTSD-206ENST00000497544 ETV7Q9Y603 341 aa16.59■□□□□ 0.25
CTSD-206ENST00000497544 FUOMA2VDF0 154 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 MCRIP1C9JLW8 97 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 ZNF701M0R085 212 aaPredicted RBP16.58■□□□□ 0.24
CTSD-206ENST00000497544 BLVRBP30043 206 aaPredicted RBP16.58■□□□□ 0.24
CTSD-206ENST00000497544 VEGFCP49767 419 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 EDDM3BP56851 147 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 PLA2G7Q13093 441 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.24
CTSD-206ENST00000497544 EDDM3AQ14507 147 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 RAB12Q6IQ22 244 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 BPIFB2Q8N4F0 458 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 OR56B1Q8NGI3 324 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 OR5H6Q8NGV6 325 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 NEK7Q8TDX7 302 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms