RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 A0A0A6YYD4 124 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 CLPXO76031 633 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 ZNF205O95201 554 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 RPS2P15880 293 aaKnown RBP16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 PTBP1P26599 531 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 VEGFCP49767 419 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 PNLIPRP3Q17RR3 467 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 CD276Q5ZPR3 534 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 METAP1DQ6UB28 335 aaPredicted RBP16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 Q6ZTK2 550 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 C8orf46Q8TAG6 207 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 RAB3CQ96E17 227 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 CCL13Q99616 98 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 REG4Q9BYZ8 158 aa16.42■□□□□ 0.22
SCAMP3-209ENST00000497470 CTDSP2O14595 271 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 PSPNO60542 156 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 HIST1H1DP16402 221 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 DUSP1P28562 367 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 S100A5P33763 92 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 GMFBP60983 142 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 PITPNAQ00169 270 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 MEF2CQ06413 473 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 ESCO2Q56NI9 601 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 PAN3Q58A45 887 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 WDR25Q64LD2 544 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 SLC35E4Q6ICL7 350 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 LYPD2Q6UXB3 125 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 SPNS3Q6ZMD2 512 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 ZNF554Q86TJ5 538 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 SUMF2Q8NBJ7 301 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 C19orf18Q8NEA5 215 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 NICN1Q9BSH3 213 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 DPCDQ9BVM2 203 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 PLEKHJ1Q9NW61 149 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 CTSZQ9UBR2 303 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 SLC25A10Q9UBX3 287 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 CLN8Q9UBY8 286 aa16.41■□□□□ 0.22
SCAMP3-209ENST00000497470 TRBV6-6A0A0A6YYG2 114 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 IGHV4-61A0A0C4DH41 118 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 TMEM82A0PJX8 343 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 MFNGO00587 321 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 SOCS1O15524 211 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 HPGDSO60760 199 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 FOXH1O75593 365 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 GABRR1P24046 479 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 TALDO1P37837 337 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 ETV6P41212 452 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 OR3A1P47881 315 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 HOXA4Q00056 320 aaPredicted RBP16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 PLA2G7Q13093 441 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 SRSF7Q16629 238 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 CR1LQ2VPA4 569 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 ZNRF1Q8ND25 227 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 ST8SIA4Q92187 359 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 Q96MF0 132 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 MIXL1Q9H2W2 232 aa16.4■□□□□ 0.22
SCAMP3-209ENST00000497470 DVL1O14640 695 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 RGS5O15539 181 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 LIPFP07098 398 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 ELK1P19419 428 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 ZNF260Q3ZCT1 412 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 BIVMQ86UB2 503 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 BATF2Q8N1L9 274 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 ASCC1Q8N9N2 400 aaKnown RBP16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 SOSTQ9BQB4 213 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 SSBP3Q9BWW4 388 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 PECRQ9BY49 303 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 C6orf62Q9GZU0 229 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 MGAT4AQ9UM21 535 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 NOTCH2Q04721 2471 aa16.39■□□□□ 0.21
SCAMP3-209ENST00000497470 EIF4EP06730 217 aaKnown RBP16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 CDK2P24941 298 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 MRPS10P82664 201 aaKnown RBP16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 GRK1Q15835 563 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 PLAC9Q5JTB6 97 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 ATAD3CQ5T2N8 411 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 ZNF497Q6ZNH5 498 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 GDPD3Q7L5L3 318 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 FAM216BQ8N7L0 139 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 OR4S1Q8NGB4 309 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 OR6Q1Q8NGQ2 317 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 CORO2AQ92828 525 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 OPN4Q9UHM6 478 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 METRNQ9UJH8 293 aa16.38■□□□□ 0.21
SCAMP3-209ENST00000497470 SIRPB1O00241 398 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 SULT1C2O00338 296 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 GATA3P23771 443 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 TNFSF8P32971 234 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 CEBPDP49716 269 aaPredicted RBP16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 SNU13P55769 128 aaKnown RBP16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 P2RX3P56373 397 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 GNB2P62879 340 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 SCN1BQ07699 218 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 MOGAT2Q3SYC2 334 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 HACD4Q5VWC8 232 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 TRAT1Q6PIZ9 186 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 LAX1Q8IWV1 398 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 LY6G5BQ8NDX9 201 aa16.37■□□□□ 0.21
SCAMP3-209ENST00000497470 TMEM185AQ8NFB2 350 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms