RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZNF83P51522 516 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 TSPAN5P62079 268 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 TNNC1P63316 161 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 XIAPP98170 497 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 C2orf80Q0P641 193 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 TMEM241Q24JQ0 296 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 CEACAM16Q2WEN9 425 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 C18orf21Q32NC0 220 aaPredicted RBP1.38□□□□□ -2.19
CD46-218ENST00000496723 LGALSLQ3ZCW2 172 aaPredicted RBP1.38□□□□□ -2.19
CD46-218ENST00000496723 ACTBL2Q562R1 376 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 ACTL10Q5JWF8 245 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 GLYATQ6IB77 296 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 Q6ZQT7 251 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 GALNT10Q86SR1 603 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 Q8NDZ9 215 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 BPIFB6Q8NFQ5 453 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 CASTOR1Q8WTX7 329 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 TNFRSF14Q92956 283 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 FXYD5Q96DB9 178 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 FMC1Q96HJ9 113 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 PITX2Q99697 317 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 SIKE1Q9BRV8 207 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 ULBP1Q9BZM6 244 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 XKR8Q9H6D3 395 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 TMBIM4Q9HC24 238 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 DOCK6Q96HP0 2047 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 LTBP2Q14767 1821 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 MYO5BQ9ULV0 1848 aa1.38□□□□□ -2.19
CD46-218ENST00000496723 IGHV3-43A0A0B4J1X8 118 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 GOLGA8IPA6NC78 632 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RBFOX3A6NFN3 312 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 MGAT4DA6NG13 374 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 F5H5P2 479 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 PSCAO43653 123 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 IGHMP01871 453 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 HLA-AP01891 365 aaKnown RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 APOA1P02647 267 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 TRGV3P03979 118 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 PSMB9P28065 219 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RPA3P35244 121 aaPredicted RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 FUSP35637 526 aaKnown RBP eCLIP1.37□□□□□ -2.19
CD46-218ENST00000496723 GCLMP48507 274 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 TTPAP49638 278 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 FOXA1P55317 472 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RAB25P57735 213 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 GOLGA7BQ2TAP0 167 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 KRTAP25-1Q3LHN0 102 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 TMEM215Q68D42 235 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 HBMQ6B0K9 141 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 FAM19A1Q7Z5A9 133 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 DPPA2Q7Z7J5 298 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RBM45Q8IUH3 476 aaKnown RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 EIF4E3Q8N5X7 224 aaKnown RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 OR4K17Q8NGC6 315 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 IFT81Q8WYA0 676 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 ZNF75CPQ92670 426 aaPredicted RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 ZNF75AQ96N20 296 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 OLFM3Q96PB7 478 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 SLC25A31Q9H0C2 315 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RAB1BQ9H0U4 201 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 TXNIPQ9H3M7 391 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 HAUS4Q9H6D7 363 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RMND1Q9NWS8 449 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 NAGKQ9UJ70 344 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 RBMX2Q9Y388 322 aaKnown RBP1.37□□□□□ -2.19
CD46-218ENST00000496723 SORL1Q92673 2214 aa1.37□□□□□ -2.19
CD46-218ENST00000496723 A0A0B4J2C4 111 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 A0A1B0GW15 77 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 MYBPHLA2RUH7 354 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ZNF729A6NN14 1252 aaPredicted RBP1.36□□□□□ -2.19
CD46-218ENST00000496723 I3L4J1 428 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ISLRO14498 428 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 MYO1DO94832 1006 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 SLC2A1P11166 492 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 GTF2F2P13984 249 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ZNF708P17019 499 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 CRABP2P29373 138 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 CBX5P45973 191 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 CACNA1SQ13698 1873 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 TRIP13Q15645 432 aaPredicted RBP1.36□□□□□ -2.19
CD46-218ENST00000496723 TNXAQ16473 311 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 NXNL2Q5VZ03 156 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ERICH5Q6P6B1 374 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 TMPPEQ6ZT21 453 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 TPGS1Q6ZTW0 290 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 C10orf107Q8IVU9 208 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ZFP82Q8N141 532 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 SPICQ8N5J4 248 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 ZNF738Q8NE65 137 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 OR2K2Q8NGT1 345 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 CCL17Q92583 94 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 APOBEC3DQ96AK3 386 aaPredicted RBP1.36□□□□□ -2.19
CD46-218ENST00000496723 ZMYND19Q96E35 227 aaPredicted RBP1.36□□□□□ -2.19
CD46-218ENST00000496723 PYURFQ96I23 114 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 PRRG3Q9BZD7 231 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 GABARAPL1Q9H0R8 117 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 GOLPH3Q9H4A6 298 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 METTL8Q9H825 291 aaKnown RBP1.36□□□□□ -2.19
CD46-218ENST00000496723 RBM12B-AS1Q9P1G2 102 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 USH1CQ9Y6N9 552 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms