RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C20orf85Q9H1P6 137 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ABCG5Q9H222 651 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ALKBH4Q9NXW9 302 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 TRAPPC4Q9Y296 219 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 B3GALT5Q9Y2C3 310 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 EMC9Q9Y3B6 208 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ABCA2Q9BZC7 2435 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 LOC102724200A0A096LPH7 203 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 IGLV3-32A0A0A0MS00 114 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ETV2O00321 342 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CXCL13O43927 109 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 HPP00738 406 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 RCC1P18754 421 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ADRA2CP18825 462 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 TNFRSF1AP19438 455 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CDKN1AP38936 164 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CCL11P51671 97 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 DSCR4P56555 118 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CSNK2A1P68400 391 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 NAAAQ02083 359 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 OR1C1Q15619 314 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 EMC4Q5J8M3 183 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 C9orf135Q5VTT2 229 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 DCAF12L2Q5VW00 463 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 SAMD13Q5VXD3 122 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 RPL22L1Q6P5R6 122 aaKnown RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 SYS1Q8N2H4 156 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 GTPBP8Q8N3Z3 284 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF676Q8N7Q3 588 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CSNK2A3Q8NEV1 391 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 OR5AK2Q8NH90 309 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 OR1S1Q8NH92 325 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ADAMTS17Q8TE56 1095 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 MCHR2Q969V1 340 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 MIB2Q96AX9 1013 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CYYR1Q96J86 154 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 INPP5EQ9NRR6 644 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CBLN4Q9NTU7 201 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 LRP12Q9Y561 859 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CPAMD8Q8IZJ3 1885 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 IQCMA0A1B0GVH7 501 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ANXA2P2A6NMY6 339 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR4C45A6NMZ5 311 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 E9PLN8 166 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 F6UZH7 168 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 AQP7O14520 342 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PGA4P0DJD7 388 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PGA3P0DJD8 388 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 CLRN1P58418 232 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 B3GALT5-AS1P59052 145 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RAB11AP62491 216 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 H3F3AP84243 136 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RAB11BQ15907 218 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PYDC2Q56P42 97 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OCIAD2Q56VL3 154 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 SLC25A53Q5H9E4 307 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ASPHD2Q6ICH7 369 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PRSS45Q7RTY3 260 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RTN4RL2Q86UN3 420 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 BEST4Q8NFU0 473 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR51A2Q8NGJ7 313 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR10S1Q8NGN2 331 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PINX1Q96BK5 328 aaKnown RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 SLC25A44Q96H78 314 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 NAA11Q9BSU3 229 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RBM24Q9BX46 236 aaKnown RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 C11orf54Q9H0W9 315 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ARV1Q9H2C2 271 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RASL12Q9NYN1 266 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 NCOA6Q14686 2063 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF726A6NNF4 738 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 K7EQM0 130 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RP2O75695 350 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 SFTPBP07988 381 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RAB40ALP0C0E4 278 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RPA2P15927 270 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF823P16415 610 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 DCTDP32321 178 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 SPATA46Q5T0L3 261 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ALKAL2Q6UX46 152 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 FAM220AQ7Z4H9 259 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 GGNQ86UU5 652 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 PDZD9Q8IXQ8 264 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 FAM58AQ8N1B3 248 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 UXS1Q8NBZ7 420 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 CLEC1AQ8NC01 280 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR51S1Q8NGJ8 323 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR5M9Q8NGP3 310 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR10D3Q8NH80 312 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 OR5R1Q8NH85 324 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 GPX8Q8TED1 209 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ZFP3Q96NJ6 502 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 SPACA5Q96QH8 159 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 MSL2Q9HCI7 577 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF319Q9P2F9 582 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 POLR1DQ9Y2S0 133 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms