RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CCL20P78556 96 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 KRTAP27-1Q3LI81 207 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 FAM24BQ8N5W8 94 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 BOD1Q96IK1 185 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 RSRP1Q9BUV0 290 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 DEPPQ9NTK1 212 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 A0A1W2PPE2 198 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 GJE1A6NN92 205 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 MPPED1O15442 326 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 FOLR2P14207 255 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 FUT3P21217 361 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 IL13RA2Q14627 380 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 OR8B8Q15620 311 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
PTPN7-217ENST00000495688 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 SLC16A13Q7RTY0 426 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 TMEM171Q8WVE6 324 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 GPR35Q9HC97 309 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 PILRBQ9UKJ0 227 aa11.21□□□□□ -0.61
PTPN7-217ENST00000495688 IGSF23A1L1A6 192 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 PINLYPA6NC86 204 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 LRRC3CA6NJW4 275 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 P04436 131 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 SCTP09683 121 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 ITGA3P26006 1051 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 SRD5A2P31213 254 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 OTX2P32243 289 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.62
PTPN7-217ENST00000495688 SLAMF9Q96A28 289 aa11.21□□□□□ -0.62
PTPN7-217ENST00000495688 FGF23Q9GZV9 251 aaPredicted RBP11.21□□□□□ -0.62
PTPN7-217ENST00000495688 A0A096LPE4 126 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF816-ZNF321PA0A0X1KG74 233 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 A0A1W2PPZ6 126 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 CYC1P08574 325 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 BCL3P20749 454 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 GNMTQ14749 295 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 TBC1D26Q86UD7 250 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 OR2C3Q8N628 320 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ZFP62Q8NB50 900 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-217ENST00000495688 MAFAQ8NHW3 353 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-217ENST00000495688 EXTL1Q92935 676 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ADGRG7Q96K78 797 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 TMED3Q9Y3Q3 217 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 C5orf52A6NGY3 159 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 SSSCA1O60232 199 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 CST7O76096 145 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 IFNA4P05014 189 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-217ENST00000495688 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 LMO1P25800 156 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 FOLR3P41439 243 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 UCP3P55916 312 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 OR2B8PP59922 312 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ADAM5Q6NVV9 412 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 OR56B2PQ8NGI1 322 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 NANPQ8TBE9 248 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 PAPOLGQ9BWT3 736 aaKnown RBP11.2□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 IL36GQ9NZH8 169 aa11.2□□□□□ -0.62
PTPN7-217ENST00000495688 K7N7A8 449 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 PAX6P26367 422 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 ATP6V0CP27449 155 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 SULT1A1P50225 295 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 FOXG1P55316 489 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-217ENST00000495688 HERPUD1Q15011 391 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 PMS2CLQ68D20 193 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 GAPTQ8N292 157 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM217Q8N7C4 229 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 CCDC71LQ8N9Z2 235 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 IFT22Q9H7X7 185 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 KCNJ16Q9NPI9 418 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 PARPBPQ9NWS1 579 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 UBE2J1Q9Y385 318 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-217ENST00000495688 CFAP47Q6ZTR5 3102 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 ADAM20O43506 726 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 TNFSF12O43508 249 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM50AO95807 157 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 S100A6P06703 90 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 AGAP20933 346 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-217ENST00000495688 HAAOP46952 286 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 GPM6AP51674 278 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 B2MP61769 119 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 HMGN3Q15651 99 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 ABLIM2Q6H8Q1 611 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF100Q8IYN0 542 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 SLC35B3Q9H1N7 401 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
PTPN7-217ENST00000495688 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPN7-217ENST00000495688 SPENQ96T58 3664 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms