RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SPRR3Q9UBC9 169 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 COPS7AQ9UBW8 275 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 TGOLN2O43493 480 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 SSX5O60225 188 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF354AO60765 605 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ICOSLGO75144 302 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 MED6O75586 246 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 TTRP02766 147 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 FABP1P07148 127 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 CTSDP07339 412 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 RBMXP38159 391 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 OR3A2P47893 321 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 SSR4P51571 173 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 FOXO1Q12778 655 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC10A1Q14973 349 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 EBPQ15125 230 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ODF4Q2M2E3 257 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 THEM4Q5T1C6 240 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 BRICD5Q6PL45 260 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 H1FNTQ75WM6 255 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 DOK3Q7L591 496 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ADAD2Q8NCV1 583 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 OR4S1Q8NGB4 309 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 OR51A2Q8NGJ7 313 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 DOK4Q8TEW6 326 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 PTPMT1Q8WUK0 201 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ROBO4Q8WZ75 1007 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 DDIT4LQ96D03 193 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ABHD14BQ96IU4 210 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 S100A13Q99584 98 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM173AQ9BQD7 235 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 PBOV1Q9GZY1 135 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 C5orf66Q9H5L9 145 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 METTL8Q9H825 291 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF701Q9NV72 531 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 MRPS28Q9Y2Q9 187 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-205ENST00000493949 TRGV5A0A0B4J1U4 118 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 DHRS7CA6NNS2 312 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 AHRRA9YTQ3 701 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 E5RGE8 158 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 C11orf98E9PRG8 122 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 H0YIZ8 118 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 J3QL48 77 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 K7EPK0 472 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 CDC14BO60729 498 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 DEDDO75618 318 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 IL18BPO95998 194 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 ACAA1P09110 424 aaPredicted RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC2A1P11166 492 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 AMY2BP19961 511 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 CTSSP25774 331 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 THBS4P35443 961 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 PTGFRP43088 359 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 GRB2P62993 217 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 PLCXD2Q0VAA5 305 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 NNATQ16517 81 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF239Q16600 458 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 ACSF3Q4G176 576 aaPredicted RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 BEX5Q5H9J7 111 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 Q6ZSR3 168 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF441Q8N8Z8 693 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 GATSQ8NAP1 163 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 OR9K2Q8NGE7 335 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 FNDC9Q8TBE3 224 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 GPR119Q8TDV5 335 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF721Q8TF20 911 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 HIST1H2BAQ96A08 127 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 TMEM230Q96A57 120 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 FGGYQ96C11 551 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 SLAMF6Q96DU3 332 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 TM2D1Q9BX74 207 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 KRTAP4-6Q9BYQ5 205 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 HIPK2Q9H2X6 1198 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 TMPRSS5Q9H3S3 457 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 COA3Q9Y2R0 106 aaPredicted RBP9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 PRR14LQ5THK1 2151 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
PDLIM1-205ENST00000493949 DEFB108AA8MXU0 73 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 P2RY10O00398 339 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SIAH2O43255 324 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SGCEO43556 437 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OR2J2O76002 312 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 FARS2O95363 451 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 TSPAN15O95858 294 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 IFNA17P01571 189 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 IGHV2-5P01817 119 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 CSN2P05814 226 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 GLAP06280 429 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms