RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MFSD1Q9H3U5 465 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 NCOR1P1Q9H4R4 102 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 RABL2AQ9UBK7 228 aaPredicted RBP1.16□□□□□ -2.22
ITGB1-216ENST00000493758 HSPE1-MOB4S4R3N1 261 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 WDR19Q8NEZ3 1342 aa1.15□□□□□ -2.22
ITGB1-216ENST00000493758 NESP48681 1621 aa1.15□□□□□ -2.22
ITGB1-216ENST00000493758 USP24Q9UPU5 2620 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 IGHV1-45A0A0A0MS14 117 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 A0A1B0GTQ1 180 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 ANKRD20A5PA0PJZ0 165 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 H0YIV9 168 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 SH2D1AO60880 128 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 RLN2P04090 185 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 SCGB1C2P0DMR2 95 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 CD9P21926 228 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 PSMB9P28065 219 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 BLVRBP30043 206 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-216ENST00000493758 COILP38432 576 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-216ENST00000493758 CCT6AP40227 531 aaKnown RBP1.15□□□□□ -2.23
ITGB1-216ENST00000493758 NOXRED1Q6NXP6 359 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 GALNT10Q86SR1 603 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 RBM45Q8IUH3 476 aaKnown RBP1.15□□□□□ -2.23
ITGB1-216ENST00000493758 FAM184AQ8NB25 1140 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 RNASE11Q8TAA1 199 aaKnown RBP1.15□□□□□ -2.23
ITGB1-216ENST00000493758 SCGB1C1Q8TD33 95 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 CCL17Q92583 94 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 PEX13Q92968 403 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 TXNDC17Q9BRA2 123 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 BLZF1Q9H2G9 400 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 SLC38A1Q9H2H9 487 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 LRRC19Q9H756 370 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 RBM12B-AS1Q9P1G2 102 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 ANXA10Q9UJ72 324 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 PSME2Q9UL46 239 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 TTC41PQ6P2S7 1318 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 PHLPP2Q6ZVD8 1323 aa1.15□□□□□ -2.23
ITGB1-216ENST00000493758 BPTFQ12830 3046 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 PCF11O94913 1555 aaKnown RBP1.14□□□□□ -2.23
ITGB1-216ENST00000493758 A6NED7 52 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 AKR7A2O43488 359 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 GPR4P46093 362 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 ZCWPW2Q504Y3 356 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 HIKESHIQ53FT3 197 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 ERICH5Q6P6B1 374 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 CYP4Z1Q86W10 505 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 OR51Q1Q8NH59 317 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 TCP10LQ8TDR4 215 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 MAL2Q969L2 176 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 PORCNQ9H237 461 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 DDX18Q9NVP1 670 aaKnown RBP1.14□□□□□ -2.23
ITGB1-216ENST00000493758 C14orf166Q9Y224 244 aaKnown RBP1.14□□□□□ -2.23
ITGB1-216ENST00000493758 BRCA2P51587 3418 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 CHD6Q8TD26 2715 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 MAST4O15021 2626 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 PDE4DIPQ5VU43 2346 aa1.14□□□□□ -2.23
ITGB1-216ENST00000493758 CELSR3Q9NYQ7 3312 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 CENPFP49454 3210 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 C19orf71A6NCJ1 209 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 SEC14L6B5MCN3 397 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 CRTAPO75718 401 aaPredicted RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 POP7O75817 140 aaKnown RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 ETHE1O95571 254 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 SOD3P08294 240 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 PRTN3P24158 256 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 BCAP31P51572 246 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 DOC2AQ14183 400 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 MMDQ15546 238 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 TMEM176BQ3YBM2 270 aaPredicted RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 HSP90AA4PQ58FG1 418 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 C10orf91Q5T1B1 145 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 DUPD1Q68J44 220 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 C16orf87Q6PH81 154 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 MSRB3Q8IXL7 192 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 OR5T3Q8NGG3 340 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 NDNFQ8TB73 568 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 LMX1AQ8TE12 382 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 DNAJC30Q96LL9 226 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 AICDAQ9GZX7 198 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 RGCCQ9H4X1 137 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 LZTFL1Q9NQ48 299 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 RPRD1BQ9NQG5 326 aaKnown RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 SLC22A14Q9Y267 594 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 STRCQ7RTU9 1775 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 RANBP2P49792 3224 aaKnown RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 NRCAMQ92823 1304 aa1.13□□□□□ -2.23
ITGB1-216ENST00000493758 EIF4G1Q04637 1599 aaKnown RBP1.13□□□□□ -2.23
ITGB1-216ENST00000493758 C5orf42Q9H799 3197 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 CHD8Q9HCK8 2581 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 A0A1B0GXF2 115 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 OR5H14A6NHG9 310 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 ODF3BA8MYP8 253 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 TP53I11O14683 189 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 TCF21O43680 179 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 TUBG1P23258 451 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 IL12BP29460 328 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 PEX19P40855 299 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 DYNC1I2Q13409 638 aaKnown RBP1.12□□□□□ -2.23
ITGB1-216ENST00000493758 GPR176Q14439 515 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 LINC00523Q86TU6 105 aa1.12□□□□□ -2.23
ITGB1-216ENST00000493758 OR10P1Q8NGE3 313 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms