RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 MEX3AA1L020 520 aaKnown RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 GEMIN2O14893 280 aaKnown RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 MGMTP16455 207 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 CCL3L1P16619 93 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 ERP29P30040 261 aaKnown RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 P2RX3P56373 397 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 MEF2CQ06413 473 aaPredicted RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 AESQ08117 197 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 ZNF273Q14593 569 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 MPV17LQ2QL34 196 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 NHLRC3Q5JS37 347 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 KRBOX4Q5JUW0 171 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 ATAD3CQ5T2N8 411 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 LINC00596Q86U02 117 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 PDZD9Q8IXQ8 264 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 Q8N7P7 452 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 OR6M1Q8NGM8 313 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 BARHL1Q9BZE3 327 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 SELENOIQ9C0D9 397 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 CST11Q9H112 138 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 V9GY05 133 aa11.48□□□□□ -0.57
CCM2-217ENST00000492883 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 TRAV1-2A0A0B4J238 106 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 SLC22A1O15245 554 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 ZNF728P0DKX0 622 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 CD37P11049 281 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 CD36P16671 472 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 PRTN3P24158 256 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 FGF9P31371 208 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 RANBP1P43487 201 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 DLX1P56177 255 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 BPIFB3P59826 476 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 ATXN7L3Q14CW9 347 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 RAB11BQ15907 218 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 METAP1DQ6UB28 335 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 RBMS3Q6XE24 437 aaKnown RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 SUMF2Q8NBJ7 301 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 TMEM104Q8NE00 496 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 C1orf147Q96MC9 270 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 SLC6A7Q99884 636 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 DPCDQ9BVM2 203 aaPredicted RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 SUCNR1Q9BXA5 334 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
CCM2-217ENST00000492883 TXNL4BQ9NX01 149 aaKnown RBP11.47□□□□□ -0.57
CCM2-217ENST00000492883 TRGV10A0A0A0MS01 117 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 SLC17A2O00624 439 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 TCF21O43680 179 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 MPIG6BO95866 241 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 CSN2P05814 226 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 VSIG8P0DPA2 414 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 ARSBP15848 533 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 GLIPR1P48060 266 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 KCNJ3P48549 501 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 P2RY14Q15391 338 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 RUSC1-AS1Q66K80 236 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 OR10K2Q6IF99 312 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 KCNG3Q8TAE7 436 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 NEK7Q8TDX7 302 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 ZNF714Q96N38 554 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 GFI1Q99684 422 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 CHCHD6Q9BRQ6 235 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 HEXA-AS1Q9H8Q6 139 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 ZNF581Q9P0T4 197 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 LINC00312Q9Y6C7 94 aa11.46□□□□□ -0.57
CCM2-217ENST00000492883 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 MEIKINA0A087WXM9 373 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 LOC100506127A0A0U1RQW1 187 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 A0A1W2PRF3 423 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 A0A1W2PRM7 423 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 ODAMA1E959 279 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 C17orf98A8MV24 154 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 H3BUI4 141 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 BPNT1O95861 308 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 RAB3BP20337 219 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 GADD45AP24522 165 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 OR10A3P58181 314 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 ERVFRD-1P60508 538 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 KLRD1Q13241 179 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 HES5Q5TA89 166 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 SLC25A28Q96A46 364 aa11.45□□□□□ -0.58
CCM2-217ENST00000492883 COQ2Q96H96 371 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms