RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CLVS2	Q5SYC1	327 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	SLX4IP	Q5VYV7	408 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PLCXD3	Q63HM9	321 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	LCN8	Q6JVE9	175 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZBTB49	Q6ZSB9	765 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	MOB3C	Q70IA8	216 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GDPD3	Q7L5L3	318 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	KCTD20	Q7Z5Y7	419 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ANKRD13B	Q86YJ7	626 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	CALHM1	Q8IU99	346 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZDHHC13	Q8IUH4	622 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	CPO	Q8IVL8	374 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GID4	Q8IVV7	300 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ENTHD1	Q8IYW4	607 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF679	Q8IYX0	411 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF561	Q8N587	486 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	RNF152	Q8N8N0	203 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	OR5P3	Q8WZ94	311 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	CREB3L1	Q96BA8	519 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	CCDC124	Q96CT7	223 aa	Known RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	NRBF2	Q96F24	287 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	TEAD3	Q99594	435 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	OSBPL10	Q9BXB5	764 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GON7	Q9BXV9	100 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	FGF23	Q9GZV9	251 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GNB4	Q9HAV0	340 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PLEKHA3	Q9HB20	300 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PLEKHA1	Q9HB21	404 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ARMC1	Q9NVT9	282 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	TAS2R1	Q9NYW7	299 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	TVP23B	Q9NYZ1	205 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PIGL	Q9Y2B2	252 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	SNX5	Q9Y5X3	404 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	IGKV1D-17	A0A075B6S4	117 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	SHISA3	A0PJX4	238 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM183A	A6NL82	134 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	LOC110117498-PIK3R3	F6TDL0	507 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602		G3V2T6	193 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602		I3L521	148 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602		M0R2N4	97 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	DLGAP1	O14490	977 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	MAGEB3	O15480	346 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	CIB2	O75838	187 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	GATB	O75879	557 aa	Known RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	DNAJC8	O75937	253 aa	Predicted RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	IGLV1-51	P01701	117 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	SEMG1	P04279	462 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM106CP	P0CH98	169 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	PSG2	P11465	335 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	PRDX2	P32119	198 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	MAGEA2	P43356	314 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	GPR12	P47775	334 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	DLX6	P56179	175 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF45	Q02386	682 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	APOF	Q13790	326 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM76B	Q5HYJ3	339 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	BCL2L15	Q5TBC7	163 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM220A	Q7Z4H9	259 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602		Q8IYB0	196 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	LINC00528	Q8N1L1	170 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	GVQW1	Q8N7I0	195 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	C5orf56	Q8N8D9	126 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	OR51E1	Q8TCB6	317 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	RGP1	Q92546	391 aa	Predicted RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	RPL3L	Q92901	407 aa	Known RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	CPNE2	Q96FN4	548 aa	Predicted RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	CNN2	Q99439	309 aa	Known RBP	4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	OVOL2	Q9BRP0	275 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	BTBD10	Q9BSF8	475 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	NMNAT2	Q9BZQ4	307 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	MOB1A	Q9H8S9	216 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	PCDHB16	Q9NRJ7	776 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	ING3	Q9NXR8	418 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	DPM3	Q9P2X0	92 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	HHLA2	Q9UM44	414 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	STUB1	Q9UNE7	303 aa		4.1	□□□□□ -1.75
SEC13-219	ENST00000492602	FAT1	Q14517	4588 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	IGHV2-26	A0A0B4J1V2	119 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	hCG_38984	A0A1B0GV85	526 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	hADV38S2	A0JD32	116 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	RFPL4A	A6NLU0	287 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	DHRS7C	A6NNS2	312 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	RFPL4AL1	F8VTS6	287 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	LINC01619	G3V211	115 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	SH2D1B	O14796	132 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	DHRS3	O75911	302 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	NDUFB8	O95169	186 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2T7	P0C7T2	308 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF728	P0DKX0	622 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CLU	P10909	449 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF20	P17024	532 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ALOX5AP	P20292	161 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	PRKACB	P22694	351 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	PEX2	P28328	305 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CEACAM3	P40198	252 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	HAAO	P46952	286 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	FUT6	P51993	359 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CRISP1	P54107	249 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ATP1B3	P54709	279 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms