RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OR5AK2Q8NH90 309 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 R3HDM4Q96D70 268 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 PELI1Q96FA3 418 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 C4orf36Q96KX1 117 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 ALG8Q9BVK2 526 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 DHDHQ9UQ10 334 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 GSTK1Q9Y2Q3 226 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 RPL36Q9Y3U8 105 aaKnown RBP7.04□□□□□ -1.28
NUP50-217ENST00000491860 HILPDAQ9Y5L2 63 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
NUP50-217ENST00000491860 RYR3Q15413 4870 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 A0A087X0M5 115 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 A0A1B0GX30 115 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 ODAMA1E959 279 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 OR4C45A6NMZ5 311 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 SIRPB1O00241 398 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 DEGS1O15121 323 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 OR2F2O95006 317 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 DUS4LO95620 317 aaKnown RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 CLIC3O95833 236 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 FAM106CPP0CH98 169 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 TMEM225BP0DP42 221 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 RAB3AP20336 220 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 CDK2P24941 298 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 DUSP1P28562 367 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 C21orf33P30042 268 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 RAB13P51153 203 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 NANOS3P60323 173 aaKnown RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 PAX5Q02548 391 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 IL13RA2Q14627 380 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 KISS1Q15726 138 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 ELP2Q6IA86 826 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 CENPVQ7Z7K6 275 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 TPRX1Q8N7U7 411 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 OR13C9Q8NGT0 318 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 OR9G1Q8NH87 305 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 WIPF2Q8TF74 440 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 TSEN15Q8WW01 171 aaKnown RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 PYDC1Q8WXC3 89 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 RNF166Q96A37 237 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 LGALS12Q96DT0 336 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 BARHL1Q9BZE3 327 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 GPR61Q9BZJ8 451 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 NECAP2Q9NVZ3 263 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 PAK1IP1Q9NWT1 392 aaPredicted RBP7.03□□□□□ -1.28
NUP50-217ENST00000491860 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
NUP50-217ENST00000491860 KBTBD11-OT1A0A1B0GTJ5 212 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 E9PQ18 207 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 G3V4G9 280 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 SLC33A1O00400 549 aaPredicted RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 CD28P10747 220 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 PAX6P26367 422 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 SLC6A1P30531 599 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 SNU13P55769 128 aaKnown RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 AESQ08117 197 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 MED21Q13503 144 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 CCDC58Q4VC31 144 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 LDLRAD2Q5SZI1 272 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 TPTE2P1Q5T6R2 138 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 PRAMEF5Q5TYX0 476 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 ZNF691Q5VV52 312 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 CCDC121Q6ZUS5 278 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 LINC00596Q86U02 117 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 C1QL4Q86Z23 238 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 OR5AU1Q8NGC0 362 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 OR51T1Q8NGJ9 327 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 RPEQ96AT9 228 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 RDH12Q96NR8 316 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 RBM14Q96PK6 669 aaKnown RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 GPER1Q99527 375 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 CITED2Q99967 270 aaPredicted RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 SLC25A33Q9BSK2 321 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 JAM3Q9BX67 310 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 MRPS18AQ9NVS2 196 aaKnown RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 ERVK13-1Q9NX77 482 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 IL36RNQ9UBH0 155 aa7.02□□□□□ -1.29
NUP50-217ENST00000491860 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
NUP50-217ENST00000491860 IGKV1-12A0A0C4DH73 117 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 LOC100130705A0A1B0GUX0 176 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 H0YJX3 145 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 PIN1P1O15428 100 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZNF780AO75290 641 aaPredicted RBP7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZFPL1O95159 310 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 IGKV1D-12P01611 117 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 PF4P02776 101 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 PF4V1P10720 104 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 GABRB1P18505 474 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 CD33P20138 364 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 DCKP27707 260 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 GLIPR1P48060 266 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms