RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GAL3ST2Q9H3Q3 398 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 TAS2R3Q9NYW6 316 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 TVP23BQ9NYZ1 205 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 NDUFA13Q9P0J0 144 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 ZMAT5Q9UDW3 170 aaKnown RBP10.37□□□□□ -0.75
USF1-206ENST00000491629 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 TMEM14AQ9Y6G1 99 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 TRGV10A0A0A0MS01 117 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 OOSP1A8MZH6 123 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 PRKYO43930 277 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 ATP6V1G1O75348 118 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 RPP14O95059 124 aaKnown RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 OR2H2O95918 312 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 CST1P01037 141 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 IGHV3-7P01780 117 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 FAM106CPP0CH98 169 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 RAP2AP10114 183 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 PRKACAP17612 351 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 CEACAM3P40198 252 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 ARHGDIBP52566 201 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 RBM39Q14498 530 aaKnown RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 HNF4GQ14541 408 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 FAM98BQ52LJ0 330 aaKnown RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 KLHL22Q53GT1 634 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 C16orf89Q6UX73 402 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 DHFR2Q86XF0 187 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 SLC35F2Q8IXU6 374 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 ENTHD1Q8IYW4 607 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 ZBTB8BQ8NAP8 495 aaPredicted RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 DNAJC9Q8WXX5 260 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 LEAP2Q969E1 77 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
USF1-206ENST00000491629 CNN2Q99439 309 aaKnown RBP10.36□□□□□ -0.75
USF1-206ENST00000491629 ODAMA1E959 279 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 TOR1AO14656 332 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 FGF16O43320 207 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 EFNB1P98172 346 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 TRIM25Q14258 630 aaKnown RBP10.35□□□□□ -0.75
USF1-206ENST00000491629 GK3PQ14409 553 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 SPIN3Q5JUX0 258 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 C9orf66Q5T8R8 295 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 Q6P435 159 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 SLC35E3Q7Z769 313 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 Q8IYB0 196 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 PRSS35Q8N3Z0 413 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 COMMD1Q8N668 190 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 RBMXL1Q96E39 390 aaKnown RBP10.35□□□□□ -0.75
USF1-206ENST00000491629 BORCS8Q96FH0 119 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 KIRREL1Q96J84 757 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 KRTAP17-1Q9BYP8 105 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 PPIL3Q9H2H8 161 aaKnown RBP10.35□□□□□ -0.75
USF1-206ENST00000491629 HMG20AQ9NP66 347 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 ARL2BPQ9Y2Y0 163 aa10.35□□□□□ -0.75
USF1-206ENST00000491629 SEC14L6B5MCN3 397 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 SYT7O43581 403 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 TMEM11P17152 192 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 MNDAP41218 407 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 PTGFRP43088 359 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 POU3F4P49335 361 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 PRRX1P54821 245 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 GP2P55259 537 aaKnown RBP10.34□□□□□ -0.75
USF1-206ENST00000491629 CDC42P60953 191 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 FHL3Q13643 280 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 KIR2DS1Q14954 304 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 AADACL4Q5VUY2 407 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 CCDC144NLQ6NUI1 221 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 MEPCEQ7L2J0 689 aaKnown RBP10.34□□□□□ -0.75
USF1-206ENST00000491629 RDH10Q8IZV5 341 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 OR5M8Q8NGP6 311 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 TOMM40LQ969M1 308 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 CREB3L1Q96BA8 519 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 ADAT3Q96EY9 351 aaPredicted RBP10.34□□□□□ -0.75
USF1-206ENST00000491629 CLN6Q9NWW5 311 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 ING3Q9NXR8 418 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 PAIP2BQ9ULR5 123 aaKnown RBP10.34□□□□□ -0.75
USF1-206ENST00000491629 ZNF256Q9Y2P7 627 aaPredicted RBP10.34□□□□□ -0.75
USF1-206ENST00000491629 GSTK1Q9Y2Q3 226 aa10.34□□□□□ -0.75
USF1-206ENST00000491629 PLECQ15149 4684 aaKnown RBP10.33□□□□□ -0.76
USF1-206ENST00000491629 TNCP24821 2201 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 J3QR06 171 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 SLC33A1O00400 549 aaPredicted RBP10.33□□□□□ -0.76
USF1-206ENST00000491629 GATBO75879 557 aaKnown RBP10.33□□□□□ -0.76
USF1-206ENST00000491629 IGKV1D-33P01593 117 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 IGKV1-33P01594 117 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 NFYBP25208 207 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 VHLP40337 213 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 KIR3DL2P43630 455 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 CDX1P47902 265 aaPredicted RBP10.33□□□□□ -0.76
USF1-206ENST00000491629 RBP2P50120 134 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 CRISP1P54107 249 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 CFHR3Q02985 330 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 PDZK1IP1Q13113 114 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 EBI3Q14213 229 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 HES1Q14469 280 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 ASPHD1Q5U4P2 390 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms