RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 CMTM4Q8IZR5 234 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 OR5T2Q8NGG2 359 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 PTX4Q96A99 478 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 SEH1LQ96EE3 360 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
CDK9-204ENST00000491521 RHBDL2Q9NX52 303 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 OR14J1Q9UGF5 321 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 A3GALT2U3KPV4 340 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 PPIAL4EA0A075B759 164 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 PPIAL4DF5H284 164 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 LDLRAD4O15165 306 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 LHBP01229 141 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 PPIAL4FP0DN26 164 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 RPS2P15880 293 aaKnown RBP11.34□□□□□ -0.59
CDK9-204ENST00000491521 ELK1P19419 428 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 VEGFCP49767 419 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 RPS27AP62979 156 aaKnown RBP11.34□□□□□ -0.59
CDK9-204ENST00000491521 TAF9Q16594 264 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 MICBQ29980 383 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
CDK9-204ENST00000491521 DTX3Q8N9I9 347 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 CHST4Q8NCG5 386 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 CMTM3Q96MX0 182 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 DIABLOQ9NR28 239 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 NLKQ9UBE8 527 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 PPIAL4AQ9Y536 164 aa11.34□□□□□ -0.59
CDK9-204ENST00000491521 DOCK11Q5JSL3 2073 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 A0A0A6YYJ9 748 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 TRAV38-1A0A0B4J264 116 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 OR2AT4A6NND4 320 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 F5H0A9 414 aaPredicted RBP11.33□□□□□ -0.6
CDK9-204ENST00000491521 LGALS8O00214 317 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 SH2D1BO14796 132 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
CDK9-204ENST00000491521 DEGS1O15121 323 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 KNG1P01042 644 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 APOA1P02647 267 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 EIF4EP06730 217 aaKnown RBP11.33□□□□□ -0.6
CDK9-204ENST00000491521 CPT2P23786 658 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 TNFSF8P32971 234 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 TALDO1P37837 337 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 GABRA2P47869 451 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
CDK9-204ENST00000491521 IKZF1Q13422 519 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 LAX1Q8IWV1 398 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 Q8NFD4 153 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 OR56B1Q8NGI3 324 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 RAB40AQ8WXH6 277 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 DIRAS2Q96HU8 199 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 TMEM165Q9HC07 324 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 AUP1Q9Y679 476 aa11.33□□□□□ -0.6
CDK9-204ENST00000491521 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 RFPL4AA6NLU0 287 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 RFPL4AL1F8VTS6 287 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 SOCS1O15524 211 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 GYPAP02724 150 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 CHRM2P08172 466 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 ZNF44P15621 663 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 FPR2P25090 351 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 BLVRBP30043 206 aaPredicted RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 PRDX2P32119 198 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 CEBPDP49716 269 aaPredicted RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 HILS1P60008 231 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 GNB2P62879 340 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 MADCAM1Q13477 382 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A1Q86YD7 464 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 OR6Q1Q8NGQ2 317 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 Q96M66 194 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 TMEM246Q9BRR3 403 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 EXTL2Q9UBQ6 330 aa11.32□□□□□ -0.6
CDK9-204ENST00000491521 MRPS7Q9Y2R9 242 aaKnown RBP11.32□□□□□ -0.6
CDK9-204ENST00000491521 TRAV18A0A075B6X5 111 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 H3BUI4 141 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.31□□□□□ -0.6
CDK9-204ENST00000491521 TRIM77I1YAP6 450 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 SIRPB1O00241 398 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 SCGNO76038 276 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 HAND1O96004 215 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 TFF1P04155 84 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 WNT2P09544 360 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 PSG2P11465 335 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 IL13RA2Q14627 380 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms