RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 RIMS4Q9H426 269 aaPredicted RBP9.15□□□□□ -0.94
VARS2-210ENST00000490699 PATZ1Q9HBE1 687 aaKnown RBP9.15□□□□□ -0.94
VARS2-210ENST00000490699 CHMP1AQ9HD42 196 aaPredicted RBP9.15□□□□□ -0.94
VARS2-210ENST00000490699 RAB9BQ9NP90 201 aa9.15□□□□□ -0.94
VARS2-210ENST00000490699 IL36RNQ9UBH0 155 aa9.15□□□□□ -0.94
VARS2-210ENST00000490699 KAAG1Q9UBP8 84 aa9.15□□□□□ -0.94
VARS2-210ENST00000490699 EXTL2Q9UBQ6 330 aa9.15□□□□□ -0.94
VARS2-210ENST00000490699 HSF4Q9ULV5 492 aa9.15□□□□□ -0.94
VARS2-210ENST00000490699 AKAP6Q13023 2319 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 TRAV18A0A075B6X5 111 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 IGHV4-30-2A0A087WSY4 118 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 TMEM30CPA0ZSE6 113 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 SLC33A1O00400 549 aaPredicted RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 CTDSP2O14595 271 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 XRCC3O43542 346 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 TPPPO94811 219 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 ECDO95905 644 aaPredicted RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 TK1P04183 234 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 EIF4EP06730 217 aaKnown RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 GSTP1P09211 210 aaKnown RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 HIST1H1DP16402 221 aaKnown RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 ELK1P19419 428 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 CDK2P24941 298 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 LMO1P25800 156 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 EFNB2P52799 333 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 EDDM3BP56851 147 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 IL18Q14116 193 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 EDDM3AQ14507 147 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 PNLIPRP3Q17RR3 467 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 C11orf91Q3C1V1 193 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 CNIH2Q6PI25 160 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 LINC00299Q6ZSB3 139 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 LAX1Q8IWV1 398 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 CD177Q8N6Q3 437 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 H1FXQ92522 213 aaKnown RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 SLC25A38Q96DW6 304 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 Q96MF0 132 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 WDFY2Q96P53 400 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 GAFA1Q96PS6 74 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 NICN1Q9BSH3 213 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 PPA2Q9H2U2 334 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 ETAA1Q9NY74 926 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 ZNF222Q9UK12 451 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 ITGB1BP2Q9UKP3 347 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 MRPS7Q9Y2R9 242 aaKnown RBP9.14□□□□□ -0.95
VARS2-210ENST00000490699 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
VARS2-210ENST00000490699 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 TRBV23-1A0A0A0MS06 115 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 FABP12A6NFH5 140 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 K7N7A8 449 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 DVL1O14640 695 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 SOCS1O15524 211 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 FOXH1O75593 365 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 IGHV2-5P01817 119 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CSN2P05814 226 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CHATP28329 748 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 MRPS10P82664 201 aaKnown RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 ATXN7L3Q14CW9 347 aaPredicted RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 PDCD1Q15116 288 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 KRBOX4Q5JUW0 171 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 Q6P435 159 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 METAP1DQ6UB28 335 aaPredicted RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 FAM131AQ6UXB0 335 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 C6orf201Q7Z4U5 140 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 TRAPPC6BQ86SZ2 158 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 FAM216BQ8N7L0 139 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 ZNRF1Q8ND25 227 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CLDND2Q8NHS1 167 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 S100ZQ8WXG8 99 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 ARHGAP5-AS1Q96IT6 56 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CMSS1Q9BQ75 279 aaKnown RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 PECRQ9BY49 303 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CHST6Q9GZX3 395 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 C12orf4Q9NQ89 552 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 KCNIP1Q9NZI2 227 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 RCC2Q9P258 522 aaKnown RBP9.13□□□□□ -0.95
VARS2-210ENST00000490699 MGAT4AQ9UM21 535 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 CENPEQ02224 2701 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
VARS2-210ENST00000490699 ARID1AO14497 2285 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 TRGV10A0A0A0MS01 117 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 TRAV24A0A0B4J272 114 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 hCG_1809904A0A1W2PP81 198 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 A0A1W2PPE2 198 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 A0A1W2PQ09 198 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 A0A1W2PR64 198 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 A0A1W2PRV1 198 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 hADV38S2A0JD32 116 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 UBE2QL1A1L167 161 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 RAB27BO00194 218 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 GNB3P16520 340 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.951e-7■■■■■ 29.2
VARS2-210ENST00000490699 TNFSF8P32971 234 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 PRSS3P35030 304 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 CBX5P45973 191 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 OR3A1P47881 315 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 TAS2R20P59543 309 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms