RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 DEGS1O15121 323 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 LDLRAD4O15165 306 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 AIREO43918 545 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 CRLF1O75462 422 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 GLAP06280 429 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 CALCBP10092 127 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 MMP9P14780 707 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 ZNF44P15621 663 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 NDUFB7P17568 137 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 MEF2CQ06413 473 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-207ENST00000490062 RAB11BQ15907 218 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 FAM120AOSQ5T036 256 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 FAHD2BQ6P2I3 314 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-207ENST00000490062 ANKRD13BQ86YJ7 626 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 OR4S1Q8NGB4 309 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 UPRTQ96BW1 309 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 FAHD2AQ96GK7 314 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 MRI1Q9BV20 369 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 FUNDC2Q9BWH2 189 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 C7orf69Q9H7B7 122 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 UNKLQ9H9P5 680 aaKnown RBP14.39□□□□□ -0.11
ERCC3-207ENST00000490062 PLGRKTQ9HBL7 147 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 AUP1Q9Y679 476 aa14.39□□□□□ -0.11
ERCC3-207ENST00000490062 M0R1W7 72 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 GEMIN2O14893 280 aaKnown RBP14.38□□□□□ -0.11
ERCC3-207ENST00000490062 AVPP01185 164 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 HNF1AP20823 631 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 OR10A3P58181 314 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 RPL31P62899 125 aaKnown RBP14.38□□□□□ -0.11
ERCC3-207ENST00000490062 RPS27AP62979 156 aaKnown RBP14.38□□□□□ -0.11
ERCC3-207ENST00000490062 UNC119Q13432 240 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 GRK1Q15835 563 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 Q71RC1 249 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-207ENST00000490062 SIRPDQ9H106 197 aa14.38□□□□□ -0.11
ERCC3-207ENST00000490062 LOC100506127A0A0U1RQW1 187 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 FUOMA2VDF0 154 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 SIRPB1O00241 398 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 GABARAPO95166 117 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 ARSBP15848 533 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 GABRR1P24046 479 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 SDC2P34741 201 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 SNU13P55769 128 aaKnown RBP14.37□□□□□ -0.11
ERCC3-207ENST00000490062 SCAND1P57086 179 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
ERCC3-207ENST00000490062 GDPD3Q7L5L3 318 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 FAM89BQ8N5H3 189 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 PTX4Q96A99 478 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 FAM3DQ96BQ1 224 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 TMEM59Q9BXS4 323 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 C19orf12Q9NSK7 152 aa14.37□□□□□ -0.11
ERCC3-207ENST00000490062 A0A1W2PPH5 198 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 CRTAPO75718 401 aaPredicted RBP14.36□□□□□ -0.11
ERCC3-207ENST00000490062 OR7C1O76099 320 aaPredicted RBP14.36□□□□□ -0.11
ERCC3-207ENST00000490062 RBP4P02753 201 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 RPL5P46777 297 aaKnown RBP14.36□□□□□ -0.11
ERCC3-207ENST00000490062 P2RX3P56373 397 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 TAF9Q16594 264 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 TMEM200BQ69YZ2 307 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 SLC16A12Q6ZSM3 486 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 H1FXQ92522 213 aaKnown RBP14.36□□□□□ -0.11
ERCC3-207ENST00000490062 CORO2AQ92828 525 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 WDFY2Q96P53 400 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 SELENOIQ9C0D9 397 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 BANF2Q9H503 90 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 RNF167Q9H6Y7 350 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
ERCC3-207ENST00000490062 MPIG6BO95866 241 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 IL1AP01583 271 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 FAM189A2Q15884 450 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 TUSC1Q2TAM9 212 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 C2orf76Q3KRA6 126 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 CHRFAM7AQ494W8 412 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 PAN3Q58A45 887 aaKnown RBP14.35□□□□□ -0.11
ERCC3-207ENST00000490062 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 SFXN4Q6P4A7 337 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 GPR141Q7Z602 305 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 CMTM4Q8IZR5 234 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 GAPTQ8N292 157 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 SUMF2Q8NBJ7 301 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 NANPQ8TBE9 248 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 COQ2Q96H96 371 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 URM1Q9BTM9 101 aaKnown RBP14.35□□□□□ -0.11
ERCC3-207ENST00000490062 DPCDQ9BVM2 203 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-207ENST00000490062 CHST6Q9GZX3 395 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 LPAR5Q9H1C0 372 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 PPA2Q9H2U2 334 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 SVEP1Q4LDE5 3571 aa14.35□□□□□ -0.11
ERCC3-207ENST00000490062 hADV38S2A0JD32 116 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 FOXI3A8MTJ6 420 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-207ENST00000490062 C17orf98A8MV24 154 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 PDCD6O75340 191 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 CA11O75493 328 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 RAB6AP20340 208 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 FUT3P21217 361 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 DLX6P56179 175 aa14.34□□□□□ -0.11
ERCC3-207ENST00000490062 CLDN12P56749 244 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms