RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PIFOQ8TCI5 191 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 RPS4Y2Q8TD47 263 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 ZNRF4Q8WWF5 429 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 C11orf40Q8WZ69 217 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 CMTM3Q96MX0 182 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 OXGR1Q96P68 337 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 OR8B4Q96RC9 309 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 HDHD2Q9H0R4 259 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 MSL2Q9HCI7 577 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 BRD7Q9NPI1 651 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 CYSLTR2Q9NS75 346 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 EXTL2Q9UBQ6 330 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 CKLFQ9UBR5 152 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 MRM2Q9UI43 246 aaKnown RBP5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 RASD1Q9Y272 281 aa5.9□□□□□ -1.46
EXOSC3-206ENST00000489414 A0A1W2PPL8 197 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 CENPXA8MT69 81 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 FZD7O75084 574 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 UPK3AO75631 287 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 VAMP5O95183 116 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ABHD16AO95870 558 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 HLA-HP01893 362 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 H2BFMP0C1H6 154 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 GP9P14770 177 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 CTLA4P16410 223 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 CCR9P51686 369 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 RAB25P57735 213 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 RPL23AP62750 156 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ROM1Q03395 351 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF79Q15937 498 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 MEP1BQ16820 701 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF260Q3ZCT1 412 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 TEX30Q5JUR7 227 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 UBE2NLQ5JXB2 153 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 FAM27D1Q5T7N8 215 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 CD276Q5ZPR3 534 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF57Q68EA5 555 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 PYHIN1Q6K0P9 492 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 FDX2Q6P4F2 183 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 DEGS2Q6QHC5 323 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 GPAT4Q86UL3 456 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 LSRQ86X29 649 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 DRAXINQ8NBI3 349 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 NOXO1Q8NFA2 376 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 OR13C5Q8NGS8 318 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 OR2AJ1Q8NGZ0 328 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 OR2G2Q8NGZ5 317 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 C17orf50Q8WW18 174 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 SLC25A44Q96H78 314 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 DUX3Q96PT4 197 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 DERL3Q96Q80 235 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 SDHCQ99643 169 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ABHD6Q9BV23 337 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 ELOVL3Q9HB03 270 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 FRRS1LQ9P0K9 344 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 SPATA2Q9UM82 520 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 DHDHQ9UQ10 334 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 COA3Q9Y2R0 106 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 KLHDC2Q9Y2U9 406 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 V9GY05 133 aa5.89□□□□□ -1.47
EXOSC3-206ENST00000489414 LOC102725191A0A1B0GVB3 256 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 LINC00854A0A1B0GVQ3 168 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 FAM240BA0A1B0GVZ2 78 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 A0A1W2PPK0 400 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 A0A1W2PRD5 423 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 A0A1W2PRF3 423 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 A0A1W2PRM7 423 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 PLSCR5A0PG75 271 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SHISA3A0PJX4 238 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 A6NJY4 79 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ACOD1A6NK06 481 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 RPL36A-HNRNPH2H7BZ11 118 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 AIPO00170 330 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SLC43A1O75387 559 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF205O95201 554 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 CALCBP10092 127 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 HLA-DOBP13765 273 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ELK1P19419 428 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 LAP3P28838 519 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SOX2P48431 317 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 POU3F4P49335 361 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 NPY4RP50391 375 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 INSL3P51460 131 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SCAND1P57086 179 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 OR10A3P58181 314 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 NANOS3P60323 173 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 RPS11P62280 158 aaKnown RBP eCLIP5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 BLCAPP62952 87 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 TNFAIP6P98066 277 aaPredicted RBP5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 TAF13Q15543 124 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 BAK1Q16611 211 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 CEP78Q5JTW2 689 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 BCL2L15Q5TBC7 163 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 PLET1Q6UQ28 207 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 AKAP14Q86UN6 197 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 KDM8Q8N371 416 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 PNKDQ8N490 385 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SLC26A10Q8NG04 563 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms