RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ODAMA1E959 279 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 CCDC182A6NF36 153 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
USP48-210ENST00000489108 J3QR06 171 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 SH2D1BO14796 132 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 OR2H2O95918 312 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 PRDX6P30041 224 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 CDK5Q00535 292 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 GIPC3Q8TF64 312 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 GSTK1Q9Y2Q3 226 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
USP48-210ENST00000489108 SNX5Q9Y5X3 404 aa12.61□□□□□ -0.39
USP48-210ENST00000489108 ZNF729A6NN14 1252 aaPredicted RBP12.6□□□□□ -0.39
USP48-210ENST00000489108 SPNP16150 400 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 ATP6V1B2P21281 511 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 CCL1P22362 96 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 POU3F4P49335 361 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 KRBOX4Q5JUW0 171 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 SPIN3Q5JUX0 258 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 TMEM236Q5W0B7 351 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 ZNF322Q6U7Q0 402 aaPredicted RBP12.6□□□□□ -0.39
USP48-210ENST00000489108 ZNF429Q86V71 674 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 PGAM4Q8N0Y7 254 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 COQ2Q96H96 371 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 KIRREL1Q96J84 757 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 ABCG5Q9H222 651 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 PLEKHA1Q9HB21 404 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
USP48-210ENST00000489108 EXOSC4Q9NPD3 245 aaKnown RBP12.6□□□□□ -0.39
USP48-210ENST00000489108 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 TCRBV5S2A0A599 114 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 TRIM64CA6NLI5 447 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 GATBO75879 557 aaKnown RBP12.59□□□□□ -0.39
USP48-210ENST00000489108 CYB5AP00167 134 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 GP9P14770 177 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 RAB7AP51149 207 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 CXCR4P61073 352 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 SCN1BQ07699 218 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 EBI3Q14213 229 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 ASPHD1Q5U4P2 390 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 TGIF2LXQ8IUE1 241 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 OR8H3Q8N146 312 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 Q8N9W7 124 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 OR1N2Q8NGR9 330 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
USP48-210ENST00000489108 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
USP48-210ENST00000489108 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
USP48-210ENST00000489108 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 SYT7O43581 403 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 RPP14O95059 124 aaKnown RBP12.58□□□□□ -0.4
USP48-210ENST00000489108 SERPINA3P01011 423 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 IGHG4P01861 327 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 CGB3P0DN86 165 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 CGB7P0DN87 165 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 VEGFCP49767 419 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 RBP2P50120 134 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 ATP1B3P54709 279 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 ACTR3P61158 418 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 CFHR3Q02985 330 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
USP48-210ENST00000489108 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 ISYNA1Q9NPH2 558 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
USP48-210ENST00000489108 ACTR3BQ9P1U1 418 aa12.58□□□□□ -0.4
USP48-210ENST00000489108 LDLRAD4O15165 306 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 SASH3O75995 380 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 JTBO76095 146 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 OR8U8P0C7N1 319 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 OSMP13725 252 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 ZNF44P15621 663 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 PSMB8P28062 276 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 GNG10P50151 68 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 BNIP1Q12981 228 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 LTC4SQ16873 150 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
USP48-210ENST00000489108 TMEM179BQ7Z7N9 219 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 MOB3BQ86TA1 216 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 HAVCR2Q8TDQ0 301 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 DCUN1D4Q92564 292 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 CCDC134Q9H6E4 229 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 GNB4Q9HAV0 340 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 TVP23BQ9NYZ1 205 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
USP48-210ENST00000489108 PLECQ15149 4684 aaKnown RBP12.57□□□□□ -0.4
USP48-210ENST00000489108 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 I3L521 148 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 RRP9O43818 475 aaKnown RBP12.56□□□□□ -0.4
USP48-210ENST00000489108 MPZL2O60487 215 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 SAP30O75446 220 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 CSN2P05814 226 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 MTCP1P56278 107 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 PDZK1IP1Q13113 114 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms