RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 GATA3P23771 443 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 SDC2P34741 201 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 DLX1P56177 255 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 PRB3Q04118 309 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-210ENST00000488228 ZNF273Q14593 569 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TIMM50Q3ZCQ8 353 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 GDPD3Q7L5L3 318 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 C8orf46Q8TAG6 207 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 SNX22Q96L94 193 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 Q96M66 194 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 FUNDC2Q9BWH2 189 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TMEM59Q9BXS4 323 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 NAA50Q9GZZ1 169 aaKnown RBP9.11□□□□□ -0.95
UBE4B-210ENST00000488228 CST11Q9H112 138 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TMEM160Q9NX00 188 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 AUP1Q9Y679 476 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TRAV40A0A0B4J280 105 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 IFITM5A6NNB3 132 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 MGST3O14880 152 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 GPR37O15354 613 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 TFAP2AP05549 437 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 LIPFP07098 398 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 ARSBP15848 533 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 CCL3L1P16619 93 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 HNF1AP20823 631 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 ALDH3B2P48448 385 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 P2RX3P56373 397 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 NCS1P62166 190 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 ARF6P62330 175 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 RPL31P62899 125 aaKnown RBP9.1□□□□□ -0.95
UBE4B-210ENST00000488228 QRFPP83859 136 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 PAX8Q06710 450 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 PLA2G7Q13093 441 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 GPR176Q14439 515 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 ATAD3CQ5T2N8 411 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 SLC16A12Q6ZSM3 486 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 RTN4RL2Q86UN3 420 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 BPIFB2Q8N4F0 458 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 SUMF2Q8NBJ7 301 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 CHST4Q8NCG5 386 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 OR51D1Q8NGF3 324 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 COQ2Q96H96 371 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 TBX15Q96SF7 602 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 NICN1Q9BSH3 213 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 BEX2Q9BXY8 128 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 SIRPDQ9H106 197 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-210ENST00000488228 STEAP1Q9UHE8 339 aa9.1□□□□□ -0.95
UBE4B-210ENST00000488228 A0A0A6YYD4 124 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 TMEM272A0A1B0GTI8 110 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 TMEM14DPA8MWL7 114 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 AIPO00170 330 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 CRLF1O75462 422 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 FSHBP01225 129 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 MMP9P14780 707 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 LMO1P25800 156 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 SRP14P37108 136 aaKnown RBP9.09□□□□□ -0.95
UBE4B-210ENST00000488228 RPS27AP62979 156 aaKnown RBP9.09□□□□□ -0.95
UBE4B-210ENST00000488228 AESQ08117 197 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 MPV17LQ2QL34 196 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 C11orf91Q3C1V1 193 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 CHRFAM7AQ494W8 412 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 KLF17Q5JT82 389 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-210ENST00000488228 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 METTL11BQ5VVY1 283 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 SIGIRRQ6IA17 410 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 SFXN4Q6P4A7 337 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 VMO1Q7Z5L0 202 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 GPR141Q7Z602 305 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 KCNG3Q8TAE7 436 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 PPP1R35Q8TAP8 253 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 PLPPR1Q8TBJ4 325 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 NEK7Q8TDX7 302 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 DYRK2Q92630 601 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 UPRTQ96BW1 309 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 WDFY2Q96P53 400 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 DPCDQ9BVM2 203 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-210ENST00000488228 IFT22Q9H7X7 185 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 SIRT7Q9NRC8 400 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 PCDHB16Q9NRJ7 776 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 RCC2Q9P258 522 aaKnown RBP9.09□□□□□ -0.95
UBE4B-210ENST00000488228 GHRLQ9UBU3 117 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 LPAR3Q9UBY5 353 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 CUBNO60494 3623 aa9.09□□□□□ -0.95
UBE4B-210ENST00000488228 NOTOA8MTQ0 251 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 TOX4O94842 621 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 GABARAPO95166 117 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 CSN2P05814 226 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 SRD5A1P18405 259 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 CFPP27918 469 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms