RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 MAD2L1BPQ15013 274 aaPredicted RBP2.06□□□□□ -2.08
TTC3-220ENST00000487711 QPRTQ15274 297 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 DNAL1Q4LDG9 190 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 ORMDL2Q53FV1 153 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 TPTE2P1Q5T6R2 138 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 KCTD16Q68DU8 428 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 RWDD4Q6NW29 188 aaKnown RBP2.06□□□□□ -2.08
TTC3-220ENST00000487711 FBXW12Q6X9E4 464 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 MBOAT2Q6ZWT7 520 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 UNC93AQ86WB7 457 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 HORMAD1Q86X24 394 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 TMEM25Q86YD3 366 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 NKAIN4Q8IVV8 208 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 LRRC52Q8N7C0 313 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 CDRT4Q8N9R6 151 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 SNX31Q8N9S9 440 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 OR2Y1Q8NGV0 311 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 OR6K6Q8NGW6 343 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 GTF2H4Q92759 462 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 CDKL2Q92772 493 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 FLYWCH2Q96CP2 140 aaKnown RBP2.06□□□□□ -2.08
TTC3-220ENST00000487711 ANKRD36BP1Q96IX9 119 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 SULT4A1Q9BR01 284 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 HDHD2Q9H0R4 259 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 C1orf198Q9H425 327 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 TMEM9BQ9NQ34 198 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 XPNPEP1Q9NQW7 623 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 MAT2BQ9NZL9 334 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 NXT1Q9UKK6 140 aaKnown RBP2.06□□□□□ -2.08
TTC3-220ENST00000487711 TFR2Q9UP52 801 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 ST3GAL6Q9Y274 331 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 SNX24Q9Y343 169 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 PPIL1Q9Y3C6 166 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 FADS3Q9Y5Q0 445 aa2.06□□□□□ -2.08
TTC3-220ENST00000487711 KMT2BQ9UMN6 2715 aaPredicted RBP2.06□□□□□ -2.08
TTC3-220ENST00000487711 IGLV1-36A0A0B4J1U3 117 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 A0A0B4J2E0 115 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 A0A0U1RQV1 116 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TMEM213A2RRL7 107 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 MGAT4DA6NG13 374 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 BPY2O14599 106 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SLC16A4O15374 487 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 GATCO43716 136 aaKnown RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 ALOX12BO75342 701 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 CDRT1O95170 752 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 HLA-DQA1P01909 254 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TNNC2P02585 160 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 ZNF806P0C7X5 589 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 OR5H8P0DN80 308 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 GABRG2P18507 467 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 RAB5AP20339 215 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TAC1P20366 129 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 USF1P22415 310 aaPredicted RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 WARSP23381 471 aaKnown RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 S100A5P33763 92 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SSTR5P35346 364 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 CEACAM3P40198 252 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 MAGEA3P43357 314 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 MARCKSL1P49006 195 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 DNASE1L1P49184 302 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 RND2P52198 227 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 RAP1GDS1P52306 607 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TAS2R60P59551 318 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 UBE2NP61088 152 aaKnown RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 NAA20P61599 178 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 NCALDP61601 193 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 ELF3P78545 371 aaPredicted RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 MRPS25P82663 173 aaKnown RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 C2orf80Q0P641 193 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 PMS2P3Q13401 168 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 FAHD1Q6P587 224 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 DCUN1D2Q6PH85 259 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TMEM205Q6UW68 189 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SETD3Q86TU7 594 aaPredicted RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 CYP4Z1Q86W10 505 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 LRRC6Q86X45 466 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 CDKL3Q8IVW4 592 aaPredicted RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 LRRC34Q8IZ02 419 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 NPWQ8N729 165 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 OR4K5Q8NGD3 323 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 OR6K2Q8NGY2 324 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 LINC01560Q8TB33 94 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 DDI1Q8WTU0 396 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TNFRSF14Q92956 283 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 OLFM3Q96PB7 478 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 VAT1Q99536 393 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TIMM17AQ99595 171 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SELENOSQ9BQE4 189 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TIMM29Q9BSF4 260 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 VCX3BQ9H321 246 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 CENPHQ9H3R5 247 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 VCX3AQ9NNX9 186 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 CISHQ9NSE2 258 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SLC17A7Q9P2U7 560 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SLC22A14Q9Y267 594 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 LRRC42Q9Y546 428 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TSSC4Q9Y5U2 329 aaPredicted RBP2.05□□□□□ -2.08
TTC3-220ENST00000487711 PUS1Q9Y606 427 aaKnown RBP eCLIP2.05□□□□□ -2.08
TTC3-220ENST00000487711 S4R3C0 116 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms