RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 RAB6AP20340 208 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 GABRR1P24046 479 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 SERPINB10P48595 397 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 PAX2Q02962 417 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 BLMHQ13867 455 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 PDCD1Q15116 288 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 TAF9Q16594 264 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 OR10K2Q6IF99 312 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 BTN2A1Q7KYR7 527 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 GLCCI1Q86VQ1 547 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 FAM89BQ8N5H3 189 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 LY6G5BQ8NDX9 201 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 FAM46BQ96A09 425 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 HIF1ANQ9NWT6 349 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 RPUSD1Q9UJJ7 312 aaKnown RBP11.03□□□□□ -0.64
COL4A6-207ENST00000487645 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.64
COL4A6-207ENST00000487645 TRBV23-1A0A0A0MS06 115 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 TRAV24A0A0B4J272 114 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 TMEM272A0A1B0GTI8 110 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 SIRPB1O00241 398 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.65
COL4A6-207ENST00000487645 LY6G6DO95868 133 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 FUT3P21217 361 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 ERP29P30040 261 aaKnown RBP11.02□□□□□ -0.65
COL4A6-207ENST00000487645 OR3A1P47881 315 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 KCNJ3P48549 501 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 RORCP51449 518 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 GRK1Q15835 563 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 IDNKQ5T6J7 187 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 GDPD3Q7L5L3 318 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 FGFRL1Q8N441 504 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-207ENST00000487645 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
COL4A6-207ENST00000487645 DCTN5Q9BTE1 182 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 LPAR5Q9H1C0 372 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 DCSTAMPQ9H295 470 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 LPAR2Q9HBW0 351 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 ABRACLQ9P1F3 81 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 CEPT1Q9Y6K0 416 aa11.02□□□□□ -0.65
COL4A6-207ENST00000487645 IGHV2-70DA0A0C4DH43 119 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 A0A0G2JMP0 313 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 A0A0X1KG70 313 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 MCRIP1C9JLW8 97 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 J3QLI3 93 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 ENSAO43768 121 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 PAX5Q02548 391 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 MEF2CQ06413 473 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 RBM39Q14498 530 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 ATAD3CQ5T2N8 411 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 DCAF12L2Q5VW00 463 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 BTNL3Q6UXE8 466 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 CLEC9AQ6UXN8 241 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 SUMF2Q8NBJ7 301 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 OR4M2Q8NGB6 313 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 H1FXQ92522 213 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 ISOC1Q96CN7 298 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 SMR3AQ99954 134 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 NUDT16L1Q9BRJ7 211 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 DPCDQ9BVM2 203 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 BARHL1Q9BZE3 327 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 CHST6Q9GZX3 395 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 KCNK15Q9H427 330 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 NCOR1P1Q9H4R4 102 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 MMP26Q9NRE1 261 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 NDUFA13Q9P0J0 144 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 RCC2Q9P258 522 aaKnown RBP11.01□□□□□ -0.65
COL4A6-207ENST00000487645 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 INSIG2Q9Y5U4 225 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 ETV7Q9Y603 341 aa11.01□□□□□ -0.65
COL4A6-207ENST00000487645 A0A0B4J203 849 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 METTL21EPA6NDL7 271 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 C22orf46C9J442 243 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 ZNF701M0R085 212 aaPredicted RBP11□□□□□ -0.65
COL4A6-207ENST00000487645 PDCD6O75340 191 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
COL4A6-207ENST00000487645 BLVRBP30043 206 aaPredicted RBP11□□□□□ -0.65
COL4A6-207ENST00000487645 RPL31P62899 125 aaKnown RBP11□□□□□ -0.65
COL4A6-207ENST00000487645 PAX8Q06710 450 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 DYNC1I2Q13409 638 aaKnown RBP11□□□□□ -0.65
COL4A6-207ENST00000487645 SIGIRRQ6IA17 410 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 RAB12Q6IQ22 244 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 OR56B1Q8NGI3 324 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 NDNFQ8TB73 568 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 ACOT12Q8WYK0 555 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 NEDD4LQ96PU5 975 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 PPA2Q9H2U2 334 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 KCNS2Q9ULS6 477 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 SPATA2Q9UM82 520 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 PEX16Q9Y5Y5 336 aa11□□□□□ -0.65
COL4A6-207ENST00000487645 SMIM31A0A1B0GVY4 71 aa10.99□□□□□ -0.65
COL4A6-207ENST00000487645 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms