RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 OR3A4PP47883 348 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 EDDM3BP56851 147 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 HILS1P60008 231 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 SRSF2Q01130 221 aaKnown RBP10.23□□□□□ -0.77
HMG20B-211ENST00000486028 SCN1BQ07699 218 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 TPBGQ13641 420 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF846Q147U1 533 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 NEDD8Q15843 81 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 NCR3LG1Q68D85 454 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 ELP2Q6IA86 826 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 C16orf87Q6PH81 154 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 UNQ9370/PRO34162Q6UXP9 181 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 ASCL4Q6XD76 172 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 BRD3OSQ6XYD6 125 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 C17orf107Q6ZR85 190 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 Q8N7P7 452 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 SIGLECL1Q8N7X8 197 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 MINDY2Q8NBR6 621 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 CHST4Q8NCG5 386 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 RSRP1Q9BUV0 290 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 NAA50Q9GZZ1 169 aaKnown RBP10.23□□□□□ -0.77
HMG20B-211ENST00000486028 METTL9Q9H1A3 318 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 NOX4Q9NPH5 578 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
HMG20B-211ENST00000486028 PAIP2BQ9ULR5 123 aaKnown RBP10.23□□□□□ -0.77
HMG20B-211ENST00000486028 CUBNO60494 3623 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 TRIM77I1YAP6 450 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 SIRPB1O00241 398 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MGST3O14880 152 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 PIN1P1O15428 100 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MRPS14O60783 128 aaKnown RBP10.22□□□□□ -0.77
HMG20B-211ENST00000486028 OR2H2O95918 312 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF44P15621 663 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 PRTN3P24158 256 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 LMO1P25800 156 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MAP2K4P45985 399 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MEF2CQ06413 473 aaPredicted RBP10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MLLT11Q13015 90 aaPredicted RBP10.22□□□□□ -0.77
HMG20B-211ENST00000486028 EDDM3AQ14507 147 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 TRAM1Q15629 374 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 GRK1Q15835 563 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 RGS21Q2M5E4 152 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 LIPKQ5VXJ0 399 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 METAP1DQ6UB28 335 aaPredicted RBP10.22□□□□□ -0.77
HMG20B-211ENST00000486028 CEACAM19Q7Z692 300 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 JAGN1Q8N5M9 183 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 Q8NFD4 153 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 OR4S1Q8NGB4 309 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 MGLLQ99685 303 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 UNKLQ9H9P5 680 aaKnown RBP10.22□□□□□ -0.77
HMG20B-211ENST00000486028 SIRT7Q9NRC8 400 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 IL36GQ9NZH8 169 aa10.22□□□□□ -0.77
HMG20B-211ENST00000486028 A0A0G2JK05 382 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 hADV38S2A0JD32 116 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 PSPNO60542 156 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF780AO75290 641 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 CDRT1O95170 752 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 HTR3BO95264 441 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 CSTBP04080 98 aaKnown RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 MAS1P04201 325 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 CPEP16870 476 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 PSMA1P25786 263 aaKnown RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 PSMD7P51665 324 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 BAMBIQ13145 260 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 GPR176Q14439 515 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 TBCEQ15813 527 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 KRTAP24-1Q3LI83 254 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 Q6P435 159 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF367Q7RTV3 350 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 PDZD9Q8IXQ8 264 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 SPARTQ8N0X7 666 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 NKAIN3Q8N8D7 197 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 OR10K1Q8NGX5 313 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 TMEM203Q969S6 136 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 MUL1Q969V5 352 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF48Q96MX3 618 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 NKX3-1Q99801 234 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 TCF7L1Q9HCS4 588 aa10.21□□□□□ -0.77
HMG20B-211ENST00000486028 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.77
HMG20B-211ENST00000486028 RNASEK-C17orf49H0YIS7 233 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 EREGO14944 169 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 ERP29P30040 261 aaKnown RBP10.2□□□□□ -0.78
HMG20B-211ENST00000486028 OR3A1P47881 315 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 UBE2E1P51965 193 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 IL13RA2Q14627 380 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 INSL4Q14641 139 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 DEFB112Q30KQ8 113 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 ANKRD13BQ86YJ7 626 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 PHC2Q8IXK0 858 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 OSR2Q8N2R0 312 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 ZDHHC22Q8N966 263 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 OR51T1Q8NGJ9 327 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 S100ZQ8WXG8 99 aa10.2□□□□□ -0.78
HMG20B-211ENST00000486028 PHYHIPQ92561 330 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms