RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 OR51E2Q9H255 320 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 OCEL1Q9H607 264 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 TXNL4BQ9NX01 149 aaKnown RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 ZNF581Q9P0T4 197 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 SSR3Q9UNL2 185 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 A0A0G2JK05 382 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 LOC100506127A0A0U1RQW1 187 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 SHISA3A0PJX4 238 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 PDCD5O14737 125 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 MGST3O14880 152 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 SLC22A1O15245 554 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 MPIG6BO95866 241 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 CCL3L1P16619 93 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 GALP22466 123 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 GADD45AP24522 165 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 DLX1P56177 255 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 P2RX3P56373 397 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 OR10A3P58181 314 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 SCGB2A2Q13296 93 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 BLMHQ13867 455 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 RAB11BQ15907 218 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 TAF9Q16594 264 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 NHLRC3Q5JS37 347 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 ATAD3CQ5T2N8 411 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 GPR157Q5UAW9 335 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 RUSC1-AS1Q66K80 236 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 TMEM200BQ69YZ2 307 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 OR10K2Q6IF99 312 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 TRAPPC6BQ86SZ2 158 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 BPIFB2Q8N4F0 458 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 Q8N7P7 452 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 NEK7Q8TDX7 302 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 LHX4Q969G2 390 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 SELENOIQ9C0D9 397 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 CST11Q9H112 138 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 DSCAML1Q8TD84 2053 aa9.74□□□□□ -0.85
HPS4-214ENST00000485842 TRAV1-2A0A0B4J238 106 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 TRAV24A0A0B4J272 114 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 A0A1W2PPH5 198 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 hADV38S2A0JD32 116 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 FUOMA2VDF0 154 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 M0R1W7 72 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 SLC17A2O00624 439 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 IFNA2P01563 188 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 UBBP0CG47 229 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 SMIM18P0DKX4 95 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 VSIG8P0DPA2 414 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 RAB3BP20337 219 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 LMO1P25800 156 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 GLIPR1P48060 266 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 CLDN12P56749 244 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 AESQ08117 197 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 KLRD1Q13241 179 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 HES5Q5TA89 166 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 BRD3OSQ6XYD6 125 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 LINC00596Q86U02 117 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 PRIMA1Q86XR5 153 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 SUMF2Q8NBJ7 301 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 DMRTB1Q96MA1 342 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 SLC6A7Q99884 636 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 DPCDQ9BVM2 203 aaPredicted RBP9.73□□□□□ -0.85
HPS4-214ENST00000485842 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
HPS4-214ENST00000485842 GHRLQ9UBU3 117 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 ZNF69Q9UC07 566 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 V9GY05 133 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 JMJD1CQ15652 2540 aa9.73□□□□□ -0.85
HPS4-214ENST00000485842 A0A1W2PRD5 423 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 A0A1W2PRF3 423 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 A0A1W2PRM7 423 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 TRIM64CA6NLI5 447 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 BPNT1O95861 308 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 CSN2P05814 226 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 ERP29P30040 261 aaKnown RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 FGF9P31371 208 aaPredicted RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 MEF2CQ06413 473 aaPredicted RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 MPV17LQ2QL34 196 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 KRBOX4Q5JUW0 171 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 BRICD5Q6PL45 260 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 ZNF782Q6ZMW2 699 aaPredicted RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 TCF23Q7RTU1 214 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 BCL6BQ8N143 479 aaPredicted RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 MRPS24Q96EL2 167 aaKnown RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 COQ2Q96H96 371 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 Q96M66 194 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 ZNF714Q96N38 554 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 RNF167Q9H6Y7 350 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 METTL8Q9H825 291 aaKnown RBP9.72□□□□□ -0.85
HPS4-214ENST00000485842 LINC00312Q9Y6C7 94 aa9.72□□□□□ -0.85
HPS4-214ENST00000485842 TRGV10A0A0A0MS01 117 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 CENPVL3A0A0U1RRI6 287 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 hCG_1809904A0A1W2PP81 198 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 A0A1W2PPE2 198 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 A0A1W2PR64 198 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 A0A1W2PRV1 198 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 ODAMA1E959 279 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms