RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TSPAN9O75954 239 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 ARG1P05089 322 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 AHSA2Q719I0 299 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 LHFPL4Q7Z7J7 247 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 TRAPPC6BQ86SZ2 158 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 Q8NFD4 153 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 GAL3ST2Q9H3Q3 398 aa13.79□□□□□ -0.2
HSPG2-209ENST00000480900 TRGV10A0A0A0MS01 117 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 DEGS1O15121 323 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 SLC34A1Q06495 639 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 SCN1BQ07699 218 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 IL13RA2Q14627 380 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 RSU1Q15404 277 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 Q499Y3 187 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 OR51T1Q8NGJ9 327 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 OR13C5Q8NGS8 318 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 CORO2AQ92828 525 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 MALSU1Q96EH3 234 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 PGLYRP3Q96LB9 341 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 FAM192AQ9GZU8 254 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 TMEM133Q9H2Q1 129 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 RAB18Q9NP72 206 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 TAS2R3Q9NYW6 316 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 NKX1-2Q9UD57 310 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-209ENST00000480900 TRRAPQ9Y4A5 3859 aa13.78□□□□□ -0.2
HSPG2-209ENST00000480900 IGHV2-26A0A0B4J1V2 119 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 ODAMA1E959 279 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 MYL12BO14950 172 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 GPX5O75715 221 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 IGFBP3P17936 291 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-209ENST00000480900 FSTP19883 344 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 C21orf33P30042 268 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-209ENST00000480900 BDKRB2P30411 391 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 PTGFRP43088 359 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 GLIPR1P48060 266 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 WNT4P56705 351 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 PROK1P58294 105 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 RPS11P62280 158 aaKnown RBP eCLIP13.77□□□□□ -0.21
HSPG2-209ENST00000480900 AESQ08117 197 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 RIPK1Q13546 671 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 DDI2Q5TDH0 399 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 MINOS1Q5TGZ0 78 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 HEPN1Q6WQI6 88 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 LIAT1Q6ZQX7 453 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 ZFP41Q8N8Y5 198 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 BPIFB6Q8NFQ5 453 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 COQ2Q96H96 371 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 CITED1Q99966 193 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 CLEC7AQ9BXN2 247 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 IL36GQ9NZH8 169 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 CKLFQ9UBR5 152 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 MINOS1-NBL1R4GNA1 71 aa13.77□□□□□ -0.21
HSPG2-209ENST00000480900 VWFP04275 2813 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 H0YJX3 145 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 CD1AP06126 327 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 PAX6P26367 422 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 ZNF93P35789 620 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-209ENST00000480900 OR3A4PP47883 348 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 GABPB1Q06547 395 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-209ENST00000480900 DYNC1I2Q13409 638 aaKnown RBP13.76□□□□□ -0.21
HSPG2-209ENST00000480900 ATXN7L3Q14CW9 347 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-209ENST00000480900 LY6EQ16553 131 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 KRBOX4Q5JUW0 171 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 LDLRAD2Q5SZI1 272 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 OR52W1Q6IF63 320 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 BRICD5Q6PL45 260 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 DYNAPQ8N1N2 210 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 ORAI1Q96D31 301 aa13.76□□□□□ -0.21
HSPG2-209ENST00000480900 NR1H4Q96RI1 486 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-209ENST00000480900 TRBV5-7A0A0A0MS05 114 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 MMP23AO75900 390 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 HTR3BO95264 441 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 KCNJ3P48549 501 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
HSPG2-209ENST00000480900 SSX2Q16385 188 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 PIGYQ3MUY2 71 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
HSPG2-209ENST00000480900 NHLRC3Q5JS37 347 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 NANOGP1Q8N7R0 232 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 OR10K1Q8NGX5 313 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 NRG4Q8WWG1 115 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 OR14A2Q96R54 314 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-209ENST00000480900 CDCA4Q9BXL8 241 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 METTL9Q9H1A3 318 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 RANBP3Q9H6Z4 567 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-209ENST00000480900 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-209ENST00000480900 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 ERGIC3Q9Y282 383 aa13.75□□□□□ -0.21
HSPG2-209ENST00000480900 TET2Q6N021 2002 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-209ENST00000480900 TRAV24A0A0B4J272 114 aa13.74□□□□□ -0.21
HSPG2-209ENST00000480900 PNMA8CA0A1B0GUJ8 204 aa13.74□□□□□ -0.21
HSPG2-209ENST00000480900 ZNF729A6NN14 1252 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms